PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY38860.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

FAR1

Protein Properties

Length: 383aa MW: 44230.2 Da PI: 7.6568

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY38860.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	41	6.1e-13	10	96	7	86
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHn 86 A+e+ Fs r s+skk+k ++e+++++fvC k g+++e ++ + rtr + rt+Ckak+ + k++ + w v+ + +e n TEY38860.1 10 AREASFSARYSNSKKNKVTNEVVWKQFVCFKAGQTDEARSVkralsgGPIKTRTRGKVRTDCKAKMSIIKQQtGSDWSVSVFTEEAN 96 8999****************************9998777678877666788999*******99988899***9998866 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MMRLHSTINA REASFSARYS NSKKNKVTNE VVWKQFVCFK AGQTDEARSV KRALSGGPIK 60 TRTRGKVRTD CKAKMSIIKQ QTGSDWSVSV FTEEANIPTC HQMQLSEIEC GGPENVGCTE 120 RDIRNFERDL RDEQKGIDAE TVIEFFTSEK EKDSTFSFVY ETDSVYTKKK WMEFQEEMSR 180 SHGYSVQHAS TRDESDDIVI YNVMSFQSCS SSKPRLLVHD IRRDHISCNC GKFEFDGIPC 240 RHMLAFFRIS QIFELPDRYL LKRWAREAKV GIVYTMDDEN TNDDPTNFLV SRRSKLSYKA 300 SILIDDAPLT NERTKFLDEQ LDYLHVNFLK PRACRGCGLV VDVGFVEYHM TNATAQICMT 360 DQLQIIATTT MNMHMKKIDV RSW

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MMRLHSTINA REASFSARYS NSKKNKVTNE VVWKQFVCFK AGQTDEARSV KRALSGGPIK  60
TRTRGKVRTD CKAKMSIIKQ QTGSDWSVSV FTEEANIPTC HQMQLSEIEC GGPENVGCTE  120
RDIRNFERDL RDEQKGIDAE TVIEFFTSEK EKDSTFSFVY ETDSVYTKKK WMEFQEEMSR  180
SHGYSVQHAS TRDESDDIVI YNVMSFQSCS SSKPRLLVHD IRRDHISCNC GKFEFDGIPC  240
RHMLAFFRIS QIFELPDRYL LKRWAREAKV GIVYTMDDEN TNDDPTNFLV SRRSKLSYKA  300
SILIDDAPLT NERTKFLDEQ LDYLHVNFLK PRACRGCGLV VDVGFVEYHM TNATAQICMT  360
DQLQIIATTT MNMHMKKIDV RSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-20	FAR1 family protein