PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY38835.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C2H2 | ||||||||
Protein Properties | Length: 175aa MW: 20141.2 Da PI: 10.2963 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.2 | 0.0012 | 84 | 106 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k F++ L H +H TEY38835.1 84 YRCEECKKLFRSYQALGGHRASH 106 9***********99999998887 PP | |||||||
2 | zf-C2H2 | 11.5 | 0.00092 | 117 | 139 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C + F++ L H r+H TEY38835.1 117 HQCPFCRRIFPSGQALGGHKRSH 139 79******************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MEKKHRCKLC FRKFANGRAL GGHMRSHMMK FYAEDSLPSS PVRSISDTTP EEHVARCLMM 60 MSRDTWHRRY EEEGEQKVIV KNKYRCEECK KLFRSYQALG GHRASHKKIK VGGVKNHQCP 120 FCRRIFPSGQ ALGGHKRSHF LQNSSRISQV LSIDLNLPAP VDDDEGTQIA ISILR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60580.1 | 1e-36 | C2H2 family protein |