PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY38654.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 183aa MW: 20463.5 Da PI: 10.4206 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.8 | 4e-05 | 3 | 23 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ C ksFs+ L H+r+H TEY38654.1 3 CKLCFKSFSNGKALGAHMRSH 23 ********************9 PP | |||||||
2 | zf-C2H2 | 16.1 | 3.2e-05 | 98 | 120 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C k+F+++ L +H +H TEY38654.1 98 HRCEECQKVFKSSQGLGSHKASH 120 79*****************9998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 183 aa Download sequence |
MDCKLCFKSF SNGKALGAHM RSHYAILPLP PKHHPDDTES SSGGGGKSKS KSKNSSRFKR 60 QRRINLEMEE ERDVALCLIM LSRDVWRRNS DCSSRKIHRC EECQKVFKSS QGLGSHKASH 120 SKRMRNSFQG REKGEVVGEC SMCPRIFKSA ALGGHKRSHL PAPKFVGNLV DLNLPAVNEE 180 ILG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G60580.1 | 4e-20 | C2H2 family protein |