PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY38245.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 250aa MW: 28781.6 Da PI: 9.1043 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.4 | 1.8e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+S+LCda+v +i+fs++gkl+ey++ TEY38245.1 9 KRIENKINRQVTFSKRRSGLLKKANEISILCDADVGLIVFSTKGKLFEYAT 59 79***********************************************86 PP | |||||||
2 | K-box | 107.4 | 1.7e-35 | 77 | 174 | 3 | 100 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++ k+ e +s++ e+akLk+++e Lqr+qRh++GedL++Ls+keLq+Le+qL++slk+iR +Kn+l+ e+i+elqkk k+lqe+n+ L kk++e TEY38245.1 77 ERQLKEPEPDSPASWSLEHAKLKARMEVLQRNQRHYMGEDLDTLSMKELQNLEHQLDDSLKHIRRRKNQLMNESISELQKKDKALQEQNNILAKKIKE 174 56666666666889*********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KANEISILCD ADVGLIVFST KGKLFEYATD 60 SCMERILERY ERHSYAERQL KEPEPDSPAS WSLEHAKLKA RMEVLQRNQR HYMGEDLDTL 120 SMKELQNLEH QLDDSLKHIR RRKNQLMNES ISELQKKDKA LQEQNNILAK KIKEREKETA 180 AAATMEQQQN HNLDSSGFGH PHHMGMGSFN HSNEMYQVEG EGAAAAGGMS VTQCQNQFSN 240 PVMPPWMLRS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 140 | 173 | RRRKNQLMNESISELQKKDKALQEQNNILAKKIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 2e-91 | MIKC_MADS family protein |