PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY37616.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 484aa MW: 54956.6 Da PI: 5.0041

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY37616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00051	162	178	1	17
EEETTTTEEESSHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLk 17 y+Cp+Cgk+++ + L+ TEY37616.1 162 YVCPNCGKRYTALDALQ 178 9**********999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MASIDPFNRL VKLAARAFYD DITTKGENQQ KTGRSDNRGI AVVVLDALTR RQWVREEDLA 60 KDLKLHTKQL RRTLRFFEEE KLVARDHRKE TAKGAKVYNA AVAATGDSQQ TGREGDDKQK 120 MHVHSYCCLD YAQIYDVVRY RLHRMKKKLK DELESKNTIQ EYVCPNCGKR YTALDALQLI 180 TPYDEYFHCE SCTGVLVAES DKLAIQDLGD GDDNARKHRH DKIKDMLSKM EVQLKPLIDQ 240 LARVKDLPIP EFGNLQAWEA RAHAAGRSAN GDLTANDPSK SSQGFGFGGT PMPYVGETKV 300 GLLLNFFHFM CEVEVAFSGI GEKGEMAKSE TPMKVLPPWM IKDGMSLTKE QRGETKAEMK 360 TDGTLTAPEV SDDKKSSTVN DEKKSIQDEY VKAYYAALLM RQREQEETMN RPELANTISN 420 EDYYTTAERQ VGTKSKRDED YEGDDVNWEE AAPPTVGQTR QFKVDLNEEA EVSEEEDDID 480 WEEG

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MASIDPFNRL VKLAARAFYD DITTKGENQQ KTGRSDNRGI AVVVLDALTR RQWVREEDLA  60
KDLKLHTKQL RRTLRFFEEE KLVARDHRKE TAKGAKVYNA AVAATGDSQQ TGREGDDKQK  120
MHVHSYCCLD YAQIYDVVRY RLHRMKKKLK DELESKNTIQ EYVCPNCGKR YTALDALQLI  180
TPYDEYFHCE SCTGVLVAES DKLAIQDLGD GDDNARKHRH DKIKDMLSKM EVQLKPLIDQ  240
LARVKDLPIP EFGNLQAWEA RAHAAGRSAN GDLTANDPSK SSQGFGFGGT PMPYVGETKV  300
GLLLNFFHFM CEVEVAFSGI GEKGEMAKSE TPMKVLPPWM IKDGMSLTKE QRGETKAEMK  360
TDGTLTAPEV SDDKKSSTVN DEKKSIQDEY VKAYYAALLM RQREQEETMN RPELANTISN  420
EDYYTTAERQ VGTKSKRDED YEGDDVNWEE AAPPTVGQTR QFKVDLNEEA EVSEEEDDID  480
WEEG