PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY37563.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 314aa    MW: 35221.6 Da    PI: 7.6586
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY37563.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.63.8e-0792112526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                  C+ +++ G+C+ Gd C F+Hg
  TEY37563.1  92 VCPEYRK-GHCRKGDACEFSHG 112
                 5******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MMMGTIDIPP RRQHQLLLSG SPTAAFSKFL PCNDIDDSDD EPYASDNFRM YEFKVRKCSR  60
SRSHDWTDCP FAHPGEKARR RDPRRFRYSG LVCPEYRKGH CRKGDACEFS HGVFECWLHP  120
SRYRTEACKD GKGCRRKVCF FAHSSRQLRL VPDPEPAPED KRKSSGHCCL YCHHGLKSAT  180
ASPTSTLIAH NISPPMSPLY KGDIGDMGFA SLDSYKDALA ELMASFEAMS PPEAEGRLQG  240
GLPWLDVNFN VEEPQFVMSP STPVSRGHSK FYSGESKFIQ GEYSGRNLMN ESRFSANEGG  300
SGGPDLGWVN DLLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.19e-78C3H family protein