PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY37549.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 425aa MW: 47807.1 Da PI: 9.2115

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY37549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.6e-05	55	75	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H TEY37549.1 55 CEICGKGFQRDQNLQLHKRGH 75 ******************988 PP
2	zf-C2H2	11.8	0.00077	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ TEY37549.1 129 WKCDKCSKRYAVHSDWKAHYKTC 151 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MRSKEEEAIS VTSAQNDIVQ PPLKKKRNLP GNPDPEAEVI ALSPKTLMAT NRFLCEICGK 60 GFQRDQNLQL HKRGHNLPWK LKQRTGKEAR KRVYVCPEKT CVHHHASRAL GDLTGIKKHF 120 CRKHGEKKWK CDKCSKRYAV HSDWKAHYKT CGTREYKCDC GTIFSRRDSF ITHRAFCDAL 180 AEETARFTAA SHMNHNNPNL NYHLIGSSLE LGQQHFPPIF KSNSINNLSN IPKNQPLWIP 240 QTNHPNIHIP QNNPIPKNLR EMHHHQITLD HPLIHQNPNP PPSSYHMMNW DFGPNQSPMM 300 NNKEANAPSL FSAQHQNQNQ SCAAISATAL LQRAAQIGST TTTTDSSNIL GKFGRDEDGD 360 KLCGLYSTTN SGTSGLGSDV EVSLYPPVKR CRRAMTGDEE IGLGETRDFL GMQTICNPSS 420 INGWI

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MRSKEEEAIS VTSAQNDIVQ PPLKKKRNLP GNPDPEAEVI ALSPKTLMAT NRFLCEICGK  60
GFQRDQNLQL HKRGHNLPWK LKQRTGKEAR KRVYVCPEKT CVHHHASRAL GDLTGIKKHF  120
CRKHGEKKWK CDKCSKRYAV HSDWKAHYKT CGTREYKCDC GTIFSRRDSF ITHRAFCDAL  180
AEETARFTAA SHMNHNNPNL NYHLIGSSLE LGQQHFPPIF KSNSINNLSN IPKNQPLWIP  240
QTNHPNIHIP QNNPIPKNLR EMHHHQITLD HPLIHQNPNP PPSSYHMMNW DFGPNQSPMM  300
NNKEANAPSL FSAQHQNQNQ SCAAISATAL LQRAAQIGST TTTTDSSNIL GKFGRDEDGD  360
KLCGLYSTTN SGTSGLGSDV EVSLYPPVKR CRRAMTGDEE IGLGETRDFL GMQTICNPSS  420
INGWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-129	C2H2 family protein