PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY37340.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 237aa MW: 27348.7 Da PI: 9.3969 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.6 | 2.5e-31 | 25 | 74 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ TEY37340.1 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 74 79***********************************************8 PP | |||||||
2 | K-box | 108.7 | 6.4e-36 | 93 | 190 | 5 | 100 |
K-box 5 sgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk.ekelqeenkaLrkklee 100 sg+ +ea+++++qqe++kL+++i+nLq+++R+++Ge+L+ L+l+eL++Le+++e+++ kiRskKnell+++ie++qk+ e +l+++n++Lr+k++e TEY37340.1 93 SGSGsISEANTQYYQQESSKLRAQISNLQNNNRNMVGECLGALNLRELKNLETKVERAIGKIRSKKNELLFAEIEYMQKRqEIDLHQNNQYLRAKIAE 190 4444599**********************************************************************9984679***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MEQQSDQSRE MSAERKIGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA 60 LIVFSTRGRL YEYANNSVKA TIERYKKASS DSSGSGSISE ANTQYYQQES SKLRAQISNL 120 QNNNRNMVGE CLGALNLREL KNLETKVERA IGKIRSKKNE LLFAEIEYMQ KRQEIDLHQN 180 NQYLRAKIAE TERGQQHMNL MPGSSDQYHG LVQSQPFDYL QPSDDYHRQD QTSLQLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 7e-94 | MIKC_MADS family protein |