PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY37220.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 316aa    MW: 35912.2 Da    PI: 6.1902
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY37220.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.51.6e-22107156251
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 rien + rq t++kR++gi+KKA EL vLCd++va+i+f+++g+l  ++s
  TEY37220.1 107 RIENPTSRQLTYTKRKEGIIKKAGELAVLCDTDVALIMFAPSGRLASFAS 156
                 8********************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MQHFIEDYFP DEAQRECTTV VRQLMYNDTL DQFDSCYTSL TQRTNNVSRI RSWRAGLRSL  60
DGDEKEKHGD GINGSDGDST ERVFPISFSF FLSDSPTMGR KKLTMRRIEN PTSRQLTYTK  120
RKEGIIKKAG ELAVLCDTDV ALIMFAPSGR LASFASNGRI EDILLRFVDR PDELRGGPIN  180
HEEELEEKLD KLTRKQRESQ EKMRYYEPNV EKINSALEAG VYQQFLTTAI QRIQTSKAKL  240
LGNQLGHERT ENVEVQAATM QMDDAVSLTG HSAEGNHARM RSNMDENQSG SSSAAGPHLS  300
LGFIESQKMW NKTWNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77950.29e-27MIKC_MADS family protein