PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY37061.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 969aa MW: 105750 Da PI: 7.6516

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY37061.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	903	925	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H TEY37061.1 903 YVCEICNQGFQRDQNLQMHRRRH 925 9*********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 969 aa Download sequence
MRTSNVDAFR ISISSTPSCS NQVSGTDDTE SPGDIYVWGE ILQDEIVNGA RNPNPVKNDV 60 LTPKVVQSNV VLDVQKIACG VQHIALVTRQ GEVFTWGEES GGRLGHGIEK DFSGPRLVEF 120 LAFTNIEFVA CGEFHTSALS TSGDLYTWGD GTHNVGLLGH GKNCSHWIPK RVSGSLESLH 180 VTSVACGTWH SAVVTSTGNL FTFGDGTFGA LGHGDHESVA YPKEVQALRG LKAVSISCGA 240 WHTAAIIEVS THPGGITSSR KLFTWGDGDK NRLGHGNKDT YLVPTRVSDI IDYNIQQLAC 300 GHNITVALTT SGHVFTMGST EYGQLGDPQS DGKRPRLVQD ALVGQFVEQI SCGTHHVAVL 360 TGRNEVFTWG KGANGRLGHG DLEDRNVPTM VEALRDTHVK SVVCGSNYTA SICIHKWVAG 420 PDQSLCTACK QPFGFTRKRH DCFNCGLVHC HGCLSKKSLR AALAPTPGKP HRVCESCYLK 480 LKKGADTKSG ASVTQRAPGI SQPIDRGVGK TSQVLLGSRV DPVRYLEFKS GIRGTSPSQV 540 PSRLQLRDVS FPSSFTVLQR ALKPVTTTAP YPTAPYPQQA SPQPQPYSRP VSPQSQANSA 600 MSMAALDSLQ VANEILTQQV SKLHNQVKSL KQKNESQDAE IQKLKKAAQE TTYLAAAGSS 660 KCYQAVQNVK AISQKVKEIK EKIPPEISES DSFKLVQAQV ESLLHISGAL ASEGSSLRPP 720 EPTRELNTQN IYEASVDNSG SSIRNTQSRV EGVPGTPETA SAKAQREVIE QFEPGVYVTL 780 HLLPNGTKCF KRIKFRCKQI IKLDNLLGKA EEWWTENKDR LLRKYKPSKT GSMSGDEIPP 840 ESPAEVFHES ATTFDDLNAL QSIKTLFDLM QTLKRSFALV VIVDPDAEVV SLSPKTLLES 900 DRYVCEICNQ GFQRDQNLQM HRRRHNDKRS GPIHYALEAV EFQSEVVVAV DFERQVVEFE 960 LEMVIAVDS

Sequence ? help Back to Top

Protein Sequence Length: 969 aa Download sequence

MRTSNVDAFR ISISSTPSCS NQVSGTDDTE SPGDIYVWGE ILQDEIVNGA RNPNPVKNDV  60
LTPKVVQSNV VLDVQKIACG VQHIALVTRQ GEVFTWGEES GGRLGHGIEK DFSGPRLVEF  120
LAFTNIEFVA CGEFHTSALS TSGDLYTWGD GTHNVGLLGH GKNCSHWIPK RVSGSLESLH  180
VTSVACGTWH SAVVTSTGNL FTFGDGTFGA LGHGDHESVA YPKEVQALRG LKAVSISCGA  240
WHTAAIIEVS THPGGITSSR KLFTWGDGDK NRLGHGNKDT YLVPTRVSDI IDYNIQQLAC  300
GHNITVALTT SGHVFTMGST EYGQLGDPQS DGKRPRLVQD ALVGQFVEQI SCGTHHVAVL  360
TGRNEVFTWG KGANGRLGHG DLEDRNVPTM VEALRDTHVK SVVCGSNYTA SICIHKWVAG  420
PDQSLCTACK QPFGFTRKRH DCFNCGLVHC HGCLSKKSLR AALAPTPGKP HRVCESCYLK  480
LKKGADTKSG ASVTQRAPGI SQPIDRGVGK TSQVLLGSRV DPVRYLEFKS GIRGTSPSQV  540
PSRLQLRDVS FPSSFTVLQR ALKPVTTTAP YPTAPYPQQA SPQPQPYSRP VSPQSQANSA  600
MSMAALDSLQ VANEILTQQV SKLHNQVKSL KQKNESQDAE IQKLKKAAQE TTYLAAAGSS  660
KCYQAVQNVK AISQKVKEIK EKIPPEISES DSFKLVQAQV ESLLHISGAL ASEGSSLRPP  720
EPTRELNTQN IYEASVDNSG SSIRNTQSRV EGVPGTPETA SAKAQREVIE QFEPGVYVTL  780
HLLPNGTKCF KRIKFRCKQI IKLDNLLGKA EEWWTENKDR LLRKYKPSKT GSMSGDEIPP  840
ESPAEVFHES ATTFDDLNAL QSIKTLFDLM QTLKRSFALV VIVDPDAEVV SLSPKTLLES  900
DRYVCEICNQ GFQRDQNLQM HRRRHNDKRS GPIHYALEAV EFQSEVVVAV DFERQVVEFE  960
LEMVIAVDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25250.1	4e-22	C2H2 family protein