PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY36725.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 476aa MW: 51901.9 Da PI: 9.8466

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY36725.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.6	1.1e-05	60	82	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F r nL+ H r H TEY36725.1 60 FVCEVCNKGFQREQNLQLHRRGH 82 89*******************88 PP
2	zf-C2H2	13.1	0.00028	136	158	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC++C+k + +s+ k H +t+ TEY36725.1 136 YKCEKCSKKYAVNSDWKAHSKTC 158 9******************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MAASSSSSAF LSLRDESEQQ LPPSAQPPAN KRRRNQAGNP NPDAEVIALS PKTLMATNRF 60 VCEVCNKGFQ REQNLQLHRR GHNLPWKLRQ KSTKEVKRKV YLCPEPSCVH HDPSRALGDF 120 TGIKKHYLRK HGEKRYKCEK CSKKYAVNSD WKAHSKTCGT REYRCDCGTL FSRRDSFITH 180 RAFCDALAQE SARNLNPPSI GSHLLGLSQQ DQMSQGALSS HDILRLGRPS PRYETLVSPG 240 GFRPSPRPSF VHPNHEPDHQ NQPSMFPNKS SMQGLMLLPQ LHMNNTSPNS STGLFNLSFF 300 PGNTNNNAAS NMDGGPHHST SGEDSTLFSS GNLMSIAIPS LYSTSHGMQS PSGGAQMSAT 360 ALLQKAAQMG SNTSNNAGAS SSLLKSFGDG SIYNGGGNHM QELMNSIAAA GVGPGAEYRG 420 FHGGNSNGLS SLEQAGRLTR DFLGVGEIVR SVREQQQSGM DHHRKQTQPF GEGSFH

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MAASSSSSAF LSLRDESEQQ LPPSAQPPAN KRRRNQAGNP NPDAEVIALS PKTLMATNRF  60
VCEVCNKGFQ REQNLQLHRR GHNLPWKLRQ KSTKEVKRKV YLCPEPSCVH HDPSRALGDF  120
TGIKKHYLRK HGEKRYKCEK CSKKYAVNSD WKAHSKTCGT REYRCDCGTL FSRRDSFITH  180
RAFCDALAQE SARNLNPPSI GSHLLGLSQQ DQMSQGALSS HDILRLGRPS PRYETLVSPG  240
GFRPSPRPSF VHPNHEPDHQ NQPSMFPNKS SMQGLMLLPQ LHMNNTSPNS STGLFNLSFF  300
PGNTNNNAAS NMDGGPHHST SGEDSTLFSS GNLMSIAIPS LYSTSHGMQS PSGGAQMSAT  360
ALLQKAAQMG SNTSNNAGAS SSLLKSFGDG SIYNGGGNHM QELMNSIAAA GVGPGAEYRG  420
FHGGNSNGLS SLEQAGRLTR DFLGVGEIVR SVREQQQSGM DHHRKQTQPF GEGSFH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	1e-127	C2H2 family protein