PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY36219.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRF

Protein Properties

Length: 312aa MW: 34191.9 Da PI: 8.6613

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY36219.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.1	1.7e-24	83	127	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TEY36219.1 83 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMHRGRNRSRKPVES 127 79****************************************986 PP
2	QLQ	59	1.4e-20	22	56	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 FT+ Q+ +L++Q+++yKy++a++PvPp+L+ +i+ TEY36219.1 22 LFTDVQWKELEQQAMIYKYMVAGLPVPPDLVTPIR 56 6********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MSEKAPTSVM GMGAELGYRA PLFTDVQWKE LEQQAMIYKY MVAGLPVPPD LVTPIRHSFE 60 GLYAHLFNHP ALGYCSYYGK KFDPEPGRCR RTDGKKWRCS KDAHPDSKYC ERHMHRGRNR 120 SRKPVESQST SQSLLTAVPH SSIGGSINRG NSQQMPLYSG ANSEGSSVGS NATKLQMGPY 180 GREFSFSREA SGKAGSGTGT WGLMPGQVSS SSLFKQGSDS RMLGCSSAQQ YTPHAYEPVS 240 SKQQHGLFGS DISSPTTLKQ EHLFFSEWPS TKESWSNLDN NGTNENTFSS TQLSMSTPSD 300 FTSGTAYSPN DA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	6e-45	GRF family protein