PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY36013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 172aa MW: 19079.6 Da PI: 7.2739 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 122.2 | 2.8e-38 | 9 | 109 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+++Cv+apyf +eq +++fa++hk+FGasnv+kll++lp ++r +a+ +++yeA+ar++dP+yG+v++i++lqqq+ +l+a++a lk TEY36013.1 9 PCGACKFLRRKCVRGCVFAPYFWHEQgAAHFAAIHKVFGASNVSKLLAHLPVSHRCEAALTIAYEAQARLQDPIYGCVSHIFALQQQVVNLQAQVACLK 107 7***********************9989********************************************************************999 PP DUF260 99 ee 100 e+ TEY36013.1 108 EQ 109 87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MNMTGTSSPC GACKFLRRKC VRGCVFAPYF WHEQGAAHFA AIHKVFGASN VSKLLAHLPV 60 SHRCEAALTI AYEAQARLQD PIYGCVSHIF ALQQQVVNLQ AQVACLKEQA AHSIITAANP 120 NGKFYPDLPQ NQGYLGGENS GFVEENNESF GSEMQWPFQD DLHSVPFRYI HH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58190.1 | 6e-56 | LBD family protein |