PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY35827.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 426aa MW: 46667 Da PI: 7.2512

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY35827.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.7	5.1e-17	136	185	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TEY35827.1 136 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 185 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MLDLNVGAAF SDDDLSCHNA ATTADSVAST TTSATNNAAA AEVDSRNTSV STLNFSILDK 60 YVIEIEDDVS IAANELQLFP IADSTPAAVV REKYWLNLSV PEGSAGVELG IYKAQLPETA 120 PVQPKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA 180 IKFRGVDADI NFTISDYDEE MKQMKSLSKE EFVHILRRQS NGFARGSSKY RGVALHKCGR 240 WETRMDQFVG KKAYDEATIK SNGREAITKF EFSNYDKEMN LSSGNGGNGS SLDLNLGMSL 300 SSDGNDTTRN QHYPAPDGKR LKVEPISAPQ ELMQKYPTMW AGIYSGFTPN DKELATRMSG 360 EAVPLPGYSS NWPWKMPSHG MVTPVPVLAS SAASSGFSSA TSPYFTSSVP LTNRAQFPTT 420 AFHSLQ

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MLDLNVGAAF SDDDLSCHNA ATTADSVAST TTSATNNAAA AEVDSRNTSV STLNFSILDK  60
YVIEIEDDVS IAANELQLFP IADSTPAAVV REKYWLNLSV PEGSAGVELG IYKAQLPETA  120
PVQPKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA  180
IKFRGVDADI NFTISDYDEE MKQMKSLSKE EFVHILRRQS NGFARGSSKY RGVALHKCGR  240
WETRMDQFVG KKAYDEATIK SNGREAITKF EFSNYDKEMN LSSGNGGNGS SLDLNLGMSL  300
SSDGNDTTRN QHYPAPDGKR LKVEPISAPQ ELMQKYPTMW AGIYSGFTPN DKELATRMSG  360
EAVPLPGYSS NWPWKMPSHG MVTPVPVLAS SAASSGFSSA TSPYFTSSVP LTNRAQFPTT  420
AFHSLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.2	2e-72	AP2 family protein