PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY35827.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | AP2 | ||||||||
Protein Properties | Length: 426aa MW: 46667 Da PI: 7.2512 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.7 | 5.1e-17 | 136 | 185 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TEY35827.1 136 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 185 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 426 aa Download sequence |
MLDLNVGAAF SDDDLSCHNA ATTADSVAST TTSATNNAAA AEVDSRNTSV STLNFSILDK 60 YVIEIEDDVS IAANELQLFP IADSTPAAVV REKYWLNLSV PEGSAGVELG IYKAQLPETA 120 PVQPKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA 180 IKFRGVDADI NFTISDYDEE MKQMKSLSKE EFVHILRRQS NGFARGSSKY RGVALHKCGR 240 WETRMDQFVG KKAYDEATIK SNGREAITKF EFSNYDKEMN LSSGNGGNGS SLDLNLGMSL 300 SSDGNDTTRN QHYPAPDGKR LKVEPISAPQ ELMQKYPTMW AGIYSGFTPN DKELATRMSG 360 EAVPLPGYSS NWPWKMPSHG MVTPVPVLAS SAASSGFSSA TSPYFTSSVP LTNRAQFPTT 420 AFHSLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 2e-72 | AP2 family protein |