PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY35707.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 506aa MW: 55959.5 Da PI: 8.7198

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY35707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.7	2.1e-05	79	101	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY35707.1 79 FVCEICSKGFQRDQNLQLHRRGH 101 89*******************88 PP
2	zf-C2H2	12.1	0.0006	155	177	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ TEY35707.1 155 WKCDKCSKKYAVQSDWKAHSKTC 177 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MMKISAIQEE NISNLTTAST DASAASSTGG EMYPLPYFPA PTTAPPPPAK KKRSQPGHPD 60 PGSDVISLSP RTLMATNRFV CEICSKGFQR DQNLQLHRRG HNLPWKLKQR SSKDVKKKVY 120 VCPETSCVHH DPSRALGDLT GIKKHFCRKH GEKKWKCDKC SKKYAVQSDW KAHSKTCGTR 180 EYRCDCGTLF SRRDSFITHR AFCDALAEES AKSITPTPTT PTIPTQNAPN SFSHHINLQQ 240 IQSQFSNAQQ QLPFPIKKEN QPFTLRPPWL PPPPIDLTTP SSIFQDFQEN TQNPNPSTTT 300 SMGPTTSLNH AFHHYHLHHP PPHISATALL QRAAEMGSKS STTPTPTRPH HPHVPAGESP 360 ASGFGLKLAS RDQFINDLPP FGNKAATSSS PSMLHHDMMM INTSGFHPHN QDSTFQDDDL 420 SFAGMLNNNT SPSNPKRVDE SLDFDATLNQ FSASNGGNHD DRTTRDFLGL RPLSQSDILS 480 FAGLSNCINT TSCGEHQSQS QRSWQG

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MMKISAIQEE NISNLTTAST DASAASSTGG EMYPLPYFPA PTTAPPPPAK KKRSQPGHPD  60
PGSDVISLSP RTLMATNRFV CEICSKGFQR DQNLQLHRRG HNLPWKLKQR SSKDVKKKVY  120
VCPETSCVHH DPSRALGDLT GIKKHFCRKH GEKKWKCDKC SKKYAVQSDW KAHSKTCGTR  180
EYRCDCGTLF SRRDSFITHR AFCDALAEES AKSITPTPTT PTIPTQNAPN SFSHHINLQQ  240
IQSQFSNAQQ QLPFPIKKEN QPFTLRPPWL PPPPIDLTTP SSIFQDFQEN TQNPNPSTTT  300
SMGPTTSLNH AFHHYHLHHP PPHISATALL QRAAEMGSKS STTPTPTRPH HPHVPAGESP  360
ASGFGLKLAS RDQFINDLPP FGNKAATSSS PSMLHHDMMM INTSGFHPHN QDSTFQDDDL  420
SFAGMLNNNT SPSNPKRVDE SLDFDATLNQ FSASNGGNHD DRTTRDFLGL RPLSQSDILS  480
FAGLSNCINT TSCGEHQSQS QRSWQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-96	C2H2 family protein