PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY35120.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 488aa MW: 54360.7 Da PI: 6.2281

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY35120.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.8	2e-11	179	235	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g TEY35120.1 179 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 235 57*****************4444.2455535555.779999************98 PP
2	AP2	36	1.7e-11	267	312	7	55
AP2 7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 r++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g TEY35120.1 267 RRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 312 89********988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MAAMNNWLGF SLSSNQHHPP QNPELGFHSD HPHECFDPIF ETFHTNPPPQ DWNVKDDSNI 60 NSFSCNQNQE TPKLENFLEV GVQSFAAAAA AADDDDDNHH SMINGSSHNM GLSMIKNWLR 120 SHAAPPPVEK PVDEAPPPPP EALSLSMSTS SQSSESKLGG GAVESVPRKN IETFGQRTSI 180 YRGVTRHRWT GRYEAHLWDN SCRREGQTRK GRQGGYDKEE KAARAYDLAA LKYWGTTTTT 240 NLPISNYETE IEEMKHMTRQ EYVASLRRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA 300 EAYDVAAIKF RGLNAVTNFE TSRYDVRGIM ESISLPIGAK RLKEAGKGDM QRADQGTLNN 360 TYSWPIIGFE QARPSNIHPY QRMWCKQDED SNVGFNDIHH HLQIGGNQGF LQTSMLQQNN 420 LSGHDSVPGP VSNLGEYESN AACVGSGFGY EGSFGSSGDA YRNLYYQSQQ LPSSGSAITN 480 DCTMWNGI

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MAAMNNWLGF SLSSNQHHPP QNPELGFHSD HPHECFDPIF ETFHTNPPPQ DWNVKDDSNI  60
NSFSCNQNQE TPKLENFLEV GVQSFAAAAA AADDDDDNHH SMINGSSHNM GLSMIKNWLR  120
SHAAPPPVEK PVDEAPPPPP EALSLSMSTS SQSSESKLGG GAVESVPRKN IETFGQRTSI  180
YRGVTRHRWT GRYEAHLWDN SCRREGQTRK GRQGGYDKEE KAARAYDLAA LKYWGTTTTT  240
NLPISNYETE IEEMKHMTRQ EYVASLRRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA  300
EAYDVAAIKF RGLNAVTNFE TSRYDVRGIM ESISLPIGAK RLKEAGKGDM QRADQGTLNN  360
TYSWPIIGFE QARPSNIHPY QRMWCKQDED SNVGFNDIHH HLQIGGNQGF LQTSMLQQNN  420
LSGHDSVPGP VSNLGEYESN AACVGSGFGY EGSFGSSGDA YRNLYYQSQQ LPSSGSAITN  480
DCTMWNGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-110	AP2 family protein