PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY35029.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 1329aa MW: 147466 Da PI: 6.4717

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY35029.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0013	1297	1323	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg +F+ s++ rH r+ H TEY35029.1 1297 YVCKikGCGLTFRFVSDFSRHRRKtgH 1323 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1329 aa Download sequence
MKNAEIPKWL ERLPLAPEFY PTDTEFADPI AYISKIEKEA SAFGICKVIP PLPKPSRKYV 60 LHNLNKSLSK CPELDGNCLV RSSKTDDHVR SDCDRKSSAV FTTRQQELGC EKGKKVKEGV 120 GDHVLRAQKQ VWQSGEVYTL EQFEAKAKAF AKSTLGVVKD VNPLVIETLF WKAASEKPIY 180 VEYANDVPGS GFSEPEGLLR YFDRRRRRRK TRKRNSFDRN NLGSSDSKND QVETVNSVSN 240 DKDLGIQKNP SSHTETVLNC LPSQPTRDDA SFSGRKDSQD RSEMEGTAGW KLSNSPWNLQ 300 VMARSAGSLT RFMPDDIPGV TSPMVYIGML FSWFAWHVED HELHSLNFLH VGSPKTWYAV 360 PGDDAFNFEE AIRLRAYGGN PDRLVALSHL GEKTTVLSPE AIVASGIPCC RLVQYPGEFV 420 VTFPRAYHIG FSHGFNCGEA ANFGTAKWLA IAKEAAVRRA AMNYLPMLSH QQLLYLLTMS 480 FISRIPRSLL PGVRSSRSRD RLKEERELSV KRAFIEDILC ENNRVTILLQ RNSYYHAVLW 540 DVDSLPSSSK VSELCHDADA SVLTSVGDNS PAKDDSAHDV NDLSKYISSV GYDLDDDDLS 600 YDFQIESGTL PCVACGILGF PFMAVVQPSD IASVDLLRVD PVAVPVESAH TCNVVEGSSE 660 DAKMKSMLSK KDPHCVAEAS LAAKKCRPLA HGHSSSSNHD TVSPDVKIDM GWDISDVSRK 720 SRIFCVEHAI EIEKLLSSRG GANVLVICHS DFQKIKAHAA AIAEEIAVPF SYTETLLGNA 780 SPEDLKLIDI AIDREEKVAR VEDWTSLLNI NLQHCVKMKK SSPSANVQHL LSLGGLFQNA 840 TPVSDASRTN WLSRKLRSKR HQKRLLQSKP FPSFEAAKED MNGKSEQQTA KKDDKLIQYS 900 RKRCKVGVSV ENIAGETASG PTVLPSHGAS EFHGEHLMAS SFESHSANSI VASTPVENAS 960 DKSGDSCLDI KAADGGSQKS ERCNSETVGS TTDKNGMDDV AGDEMPREED TVDEAALPSE 1020 ACDRPAENDC AVPDNIQSDG CCEIEETSRH DDCSNASDEE QVETASDQLA TENEVSNSSS 1080 SEGQRSVQTD EDDDDNQERV ISSPENCDGE TNVASRPIAL LEDNSVDDPK TEAGSKRKRK 1140 RELLGLQLDD HIHFSGFTRS PCEGLRPRAR ENPSTRVTDN REPDEEAPTV KKSRKAADQP 1200 VPRKEKKGNT KGRHQCELDG CTMKFRTKAE LLLHKGNQCP VEGCRKKFNS HKYVILHQRV 1260 HDDDRPLKCP WEGCTMSFKW AWARTEHIRV HTGERPYVCK IKGCGLTFRF VSDFSRHRRK 1320 TGHYVSPPA

Sequence ? help Back to Top

Protein Sequence Length: 1329 aa Download sequence

MKNAEIPKWL ERLPLAPEFY PTDTEFADPI AYISKIEKEA SAFGICKVIP PLPKPSRKYV  60
LHNLNKSLSK CPELDGNCLV RSSKTDDHVR SDCDRKSSAV FTTRQQELGC EKGKKVKEGV  120
GDHVLRAQKQ VWQSGEVYTL EQFEAKAKAF AKSTLGVVKD VNPLVIETLF WKAASEKPIY  180
VEYANDVPGS GFSEPEGLLR YFDRRRRRRK TRKRNSFDRN NLGSSDSKND QVETVNSVSN  240
DKDLGIQKNP SSHTETVLNC LPSQPTRDDA SFSGRKDSQD RSEMEGTAGW KLSNSPWNLQ  300
VMARSAGSLT RFMPDDIPGV TSPMVYIGML FSWFAWHVED HELHSLNFLH VGSPKTWYAV  360
PGDDAFNFEE AIRLRAYGGN PDRLVALSHL GEKTTVLSPE AIVASGIPCC RLVQYPGEFV  420
VTFPRAYHIG FSHGFNCGEA ANFGTAKWLA IAKEAAVRRA AMNYLPMLSH QQLLYLLTMS  480
FISRIPRSLL PGVRSSRSRD RLKEERELSV KRAFIEDILC ENNRVTILLQ RNSYYHAVLW  540
DVDSLPSSSK VSELCHDADA SVLTSVGDNS PAKDDSAHDV NDLSKYISSV GYDLDDDDLS  600
YDFQIESGTL PCVACGILGF PFMAVVQPSD IASVDLLRVD PVAVPVESAH TCNVVEGSSE  660
DAKMKSMLSK KDPHCVAEAS LAAKKCRPLA HGHSSSSNHD TVSPDVKIDM GWDISDVSRK  720
SRIFCVEHAI EIEKLLSSRG GANVLVICHS DFQKIKAHAA AIAEEIAVPF SYTETLLGNA  780
SPEDLKLIDI AIDREEKVAR VEDWTSLLNI NLQHCVKMKK SSPSANVQHL LSLGGLFQNA  840
TPVSDASRTN WLSRKLRSKR HQKRLLQSKP FPSFEAAKED MNGKSEQQTA KKDDKLIQYS  900
RKRCKVGVSV ENIAGETASG PTVLPSHGAS EFHGEHLMAS SFESHSANSI VASTPVENAS  960
DKSGDSCLDI KAADGGSQKS ERCNSETVGS TTDKNGMDDV AGDEMPREED TVDEAALPSE  1020
ACDRPAENDC AVPDNIQSDG CCEIEETSRH DDCSNASDEE QVETASDQLA TENEVSNSSS  1080
SEGQRSVQTD EDDDDNQERV ISSPENCDGE TNVASRPIAL LEDNSVDDPK TEAGSKRKRK  1140
RELLGLQLDD HIHFSGFTRS PCEGLRPRAR ENPSTRVTDN REPDEEAPTV KKSRKAADQP  1200
VPRKEKKGNT KGRHQCELDG CTMKFRTKAE LLLHKGNQCP VEGCRKKFNS HKYVILHQRV  1260
HDDDRPLKCP WEGCTMSFKW AWARTEHIRV HTGERPYVCK IKGCGLTFRF VSDFSRHRRK  1320
TGHYVSPPA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	200	209	RYFDRRRRRR
2	204	209	RRRRRR
3	204	210	RRRRRRK
4	204	212	RRRRRRKTR
5	205	213	RRRRRKTRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein