PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY34652.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 433aa MW: 47513.3 Da PI: 8.6977

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY34652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.5	1.2e-05	79	101	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY34652.1 79 FVCEICNKGFQRDQNLQLHRRGH 101 89*******************88 PP
2	zf-C2H2	12.7	0.00037	155	177	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H + + TEY34652.1 155 WKCEKCSKRYAVQSDWKAHSKIC 177 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MLQGMGGGVD DSLSNLTSAI SNEASINSSS NGGTIPQQHM YNPSQPPPPK KRRNLPGNPD 60 PEAEVVALSP AALMATNRFV CEICNKGFQR DQNLQLHRRG HNLPWKLKQR SNKEVVKKVY 120 ICPEPSCVHH DPARALGDLT GIKKHFFRKH GEKKWKCEKC SKRYAVQSDW KAHSKICGTR 180 EYRCDCGTLF SRRDSFITHR AFCDALAEES SRAIPQTGPI HPFQNPNFLQ LKQETLNFTL 240 PPWLSPPDPF SQNPSPAAFS ATGPSLMSAT TLLQKAAQMG VTMSGQGGKM PYHGSDHEDQ 300 NIFVGQPNGQ GIFANTSAAS TAVLPPRDEF VHGLGAYENM VMPSTSGFQG FEDSFNGMFN 360 AKRNVESFQQ DGNLMGLRKE GGGGGRGGED GKTRDFLGLR AFPHRDFSNM AGLDQMGSSS 420 SSFDHQNQAP WQS

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MLQGMGGGVD DSLSNLTSAI SNEASINSSS NGGTIPQQHM YNPSQPPPPK KRRNLPGNPD  60
PEAEVVALSP AALMATNRFV CEICNKGFQR DQNLQLHRRG HNLPWKLKQR SNKEVVKKVY  120
ICPEPSCVHH DPARALGDLT GIKKHFFRKH GEKKWKCEKC SKRYAVQSDW KAHSKICGTR  180
EYRCDCGTLF SRRDSFITHR AFCDALAEES SRAIPQTGPI HPFQNPNFLQ LKQETLNFTL  240
PPWLSPPDPF SQNPSPAAFS ATGPSLMSAT TLLQKAAQMG VTMSGQGGKM PYHGSDHEDQ  300
NIFVGQPNGQ GIFANTSAAS TAVLPPRDEF VHGLGAYENM VMPSTSGFQG FEDSFNGMFN  360
AKRNVESFQQ DGNLMGLRKE GGGGGRGGED GKTRDFLGLR AFPHRDFSNM AGLDQMGSSS  420
SSFDHQNQAP WQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-116	C2H2 family protein