PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY34509.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 1424aa MW: 158928 Da PI: 7.0778

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY34509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.5e-05	63	87	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + C+ dC+ s++rk++L+rH+ H TEY34509.1 63 FICSvdDCDSSYRRKDHLNRHMLQH 87 789999****************988 PP
2	zf-C2H2	11.2	0.0012	92	117	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 + Cp C+++F+ + n++rH + H TEY34509.1 92 FDCPveSCKRTFTLQGNMTRHVKDyH 117 679999***************98766 PP
3	zf-C2H2	11.7	0.00079	186	210	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C +Cgk+F+ s L +H +H TEY34509.1 186 HVCAepHCGKVFRYASKLCKHEDSH 210 689999***************9888 PP
4	zf-C2H2	16.8	1.9e-05	279	302	3	23
ET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirt.H 23 C+ C+ +Fs+ snL++H++ H TEY34509.1 279 CSveGCSLTFSTTSNLNKHMKAvH 302 77779***************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 1424 aa Download sequence
MPCYITGCEA LDPKKKNSKM REATNLDWIS TRWVTAWEAP SSVCLSHACS SLRFEGSLVH 60 RPFICSVDDC DSSYRRKDHL NRHMLQHQGK LFDCPVESCK RTFTLQGNMT RHVKDYHYES 120 AHTDIEQPKG SDSAKSNEYE ESQEKLLECP VKDCKRTFKS DGHMAWHVKQ FHGESACADV 180 NHPMEHVCAE PHCGKVFRYA SKLCKHEDSH VMLDSSEAYC AEPGCMKYFS NERCLKEHIQ 240 SCHQYVMCDE CGTKQLKKNI KRHMRMHKSE LSSTERINCS VEGCSLTFST TSNLNKHMKA 300 VHLELKPFAC GMPGCNKRFA FKHVRDNHEK SGCHVYTPGG DFETSDEQFR SKPRGGRKRN 360 YPVIETLMRK RIVPPSESDL DRNEGGDSPS SSAFALHPSL HIMFPAAETS DDSSDNCNDD 420 SLPNSPPESR LNDEQSAEWP ASAATRHHWH RLHQWWSKIL PKTPFLCVGE NKMTVVSGVI 480 SRQVLPACDN LCFFCPALRT RSRQPVKRYK HLISDIFPRS QDEEVNERKI GKLCDYAAKN 540 PLRIPKIADS LEQKFYKELR NENYRFVKIV MLIYRKLLLS CKDQMPLFAN SLLSVMFALL 600 DQTSQDGVLI IGCESLFDFV NNQKDGTYMF NLEGLIPKLC QVAQEVGDDE GTEHLRASGL 660 QALSAMVWFM GENSHISVEF DNIVSVVLEN YKGQSKESSG SEQEVNKAEG HVSPSEASTK 720 VPSWRIIINE KGQLNVAAEV AKSPQFWSRV CLQNMANLGK EATTMRRVLE SLFRYFDSGN 780 LWPVQGGIAF PVLKEMQLLM DDSGSTHLLL SILVKHLDHK NVLKQPDMQL DVVEVVTALA 840 RLTKMQSSVP IVSAVSDIMR HLRKSIHYSL DDASLGDKVI KWNRRFHQVV DECLTELTSK 900 VGDAGQILDV MASMLENISS ITAFPETLFH QLLPAMLHPD HQTRVGAHQV FAVVLVPSSV 960 CPQPSSDSSK VDLSRSLSRT VSVFSSSAAL FQKLRNQTTP SRENYTELNG SEQGGVMNRI 1020 KSTYSRVYSL GSSPAQDGDN GNNSTKEADA VRLRLSSHQI SLLLSSIWAQ SISPENMPEN 1080 YEAIAHTYSL ILLFSRAKTS YRDALIHSFQ LAFTLRAVSL QGGTLPASRR RSLYVLSSSM 1140 IIFSAKVYNI LPLIPVVKAA ISDKVVDPFL CLVEDSKLQI SDAGLEKQNV YGSKEDNTAA 1200 IRCLSDIKLS GELTKQSLVS VIVRNLENVL EYEEAAITEQ LVQNFVPDEM CSLGSGQMYN 1260 DNAEHGRESY VKGISGFGMD DDGHHDPNES NAPHNSKLTI ELPNLLSVDQ LLQSILETAH 1320 HVGRMSVSTG SETSYRDVAK HCESLQQGKQ QKMTLLTITS KNAAAGAAAT GGDKSQAGVS 1380 KGENGNKILG GPPVLCATEY QNNPVSFQLP SSSPYDNFLK AAGC

Sequence ? help Back to Top

Protein Sequence Length: 1424 aa Download sequence

MPCYITGCEA LDPKKKNSKM REATNLDWIS TRWVTAWEAP SSVCLSHACS SLRFEGSLVH  60
RPFICSVDDC DSSYRRKDHL NRHMLQHQGK LFDCPVESCK RTFTLQGNMT RHVKDYHYES  120
AHTDIEQPKG SDSAKSNEYE ESQEKLLECP VKDCKRTFKS DGHMAWHVKQ FHGESACADV  180
NHPMEHVCAE PHCGKVFRYA SKLCKHEDSH VMLDSSEAYC AEPGCMKYFS NERCLKEHIQ  240
SCHQYVMCDE CGTKQLKKNI KRHMRMHKSE LSSTERINCS VEGCSLTFST TSNLNKHMKA  300
VHLELKPFAC GMPGCNKRFA FKHVRDNHEK SGCHVYTPGG DFETSDEQFR SKPRGGRKRN  360
YPVIETLMRK RIVPPSESDL DRNEGGDSPS SSAFALHPSL HIMFPAAETS DDSSDNCNDD  420
SLPNSPPESR LNDEQSAEWP ASAATRHHWH RLHQWWSKIL PKTPFLCVGE NKMTVVSGVI  480
SRQVLPACDN LCFFCPALRT RSRQPVKRYK HLISDIFPRS QDEEVNERKI GKLCDYAAKN  540
PLRIPKIADS LEQKFYKELR NENYRFVKIV MLIYRKLLLS CKDQMPLFAN SLLSVMFALL  600
DQTSQDGVLI IGCESLFDFV NNQKDGTYMF NLEGLIPKLC QVAQEVGDDE GTEHLRASGL  660
QALSAMVWFM GENSHISVEF DNIVSVVLEN YKGQSKESSG SEQEVNKAEG HVSPSEASTK  720
VPSWRIIINE KGQLNVAAEV AKSPQFWSRV CLQNMANLGK EATTMRRVLE SLFRYFDSGN  780
LWPVQGGIAF PVLKEMQLLM DDSGSTHLLL SILVKHLDHK NVLKQPDMQL DVVEVVTALA  840
RLTKMQSSVP IVSAVSDIMR HLRKSIHYSL DDASLGDKVI KWNRRFHQVV DECLTELTSK  900
VGDAGQILDV MASMLENISS ITAFPETLFH QLLPAMLHPD HQTRVGAHQV FAVVLVPSSV  960
CPQPSSDSSK VDLSRSLSRT VSVFSSSAAL FQKLRNQTTP SRENYTELNG SEQGGVMNRI  1020
KSTYSRVYSL GSSPAQDGDN GNNSTKEADA VRLRLSSHQI SLLLSSIWAQ SISPENMPEN  1080
YEAIAHTYSL ILLFSRAKTS YRDALIHSFQ LAFTLRAVSL QGGTLPASRR RSLYVLSSSM  1140
IIFSAKVYNI LPLIPVVKAA ISDKVVDPFL CLVEDSKLQI SDAGLEKQNV YGSKEDNTAA  1200
IRCLSDIKLS GELTKQSLVS VIVRNLENVL EYEEAAITEQ LVQNFVPDEM CSLGSGQMYN  1260
DNAEHGRESY VKGISGFGMD DDGHHDPNES NAPHNSKLTI ELPNLLSVDQ LLQSILETAH  1320
HVGRMSVSTG SETSYRDVAK HCESLQQGKQ QKMTLLTITS KNAAAGAAAT GGDKSQAGVS  1380
KGENGNKILG GPPVLCATEY QNNPVSFQLP SSSPYDNFLK AAGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.1	1e-102	C2H2 family protein