PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY33457.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 392aa MW: 42255 Da PI: 9.57

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY33457.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.6	1e-05	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY33457.1 74 FVCEICNKGFQRDQNLQLHRRGH 96 89*******************88 PP
2	zf-C2H2	12.6	0.00042	150	172	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ TEY33457.1 150 WKCEKCSKIYAVQSDWKAHSKTC 172 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MAIPSSSENG SCSRVNRDIG TLNSMLPNST TIAAAATTTP PIKPKKKRNL PGNPDPDAEV 60 IALSPKTLMT ANRFVCEICN KGFQRDQNLQ LHRRGHNLPW KLKQRSTKEA RKRAYVCPEP 120 SCLHHHPSRA LGDLTGIKKH YCRKHGEKKW KCEKCSKIYA VQSDWKAHSK TCGTREYRCD 180 CGTLFSRKDS FITHRAFCDA LAEESARLSA VTNSILDPDS ILAPNPNFAP APAPVPAPAA 240 TQPYLFTTPN ILSFSPGHHR QFGQSWGPQP PQIPMDLSHA EQTLAPLYQG MGSAAMSATA 300 LLQRAAAVGP AHVGSSSMAG LDMAWQRGGG GGDVLTRDFL GLTGGGSSSG GGGGGGREEL 360 LPLVKLSAFE RDHSYVNVMK QHGYGFSGWG NC

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MAIPSSSENG SCSRVNRDIG TLNSMLPNST TIAAAATTTP PIKPKKKRNL PGNPDPDAEV  60
IALSPKTLMT ANRFVCEICN KGFQRDQNLQ LHRRGHNLPW KLKQRSTKEA RKRAYVCPEP  120
SCLHHHPSRA LGDLTGIKKH YCRKHGEKKW KCEKCSKIYA VQSDWKAHSK TCGTREYRCD  180
CGTLFSRKDS FITHRAFCDA LAEESARLSA VTNSILDPDS ILAPNPNFAP APAPVPAPAA  240
TQPYLFTTPN ILSFSPGHHR QFGQSWGPQP PQIPMDLSHA EQTLAPLYQG MGSAAMSATA  300
LLQRAAAVGP AHVGSSSMAG LDMAWQRGGG GGDVLTRDFL GLTGGGSSSG GGGGGGREEL  360
LPLVKLSAFE RDHSYVNVMK QHGYGFSGWG NC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-113	C2H2 family protein