PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY32681.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | NF-YC | ||||||||
Protein Properties | Length: 253aa MW: 28141.7 Da PI: 5.6158 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 175.8 | 4.3e-55 | 76 | 179 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q i++atdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlr+w+h+eenkrrtl+k+diaaa+trtdifdflvdiv TEY32681.1 76 QLQNFWATQyeeIDQATDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 174 89*****99888999************************************************************************************ PP NF-YC 97 prdel 101 pr++l TEY32681.1 175 PREDL 179 **987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MDQQGNGQAQ GMGSSAQMPY PVNPYQANQM TGASSPAASS QSPRAAGLSA SPAQMAQHQL 60 AYQHIQQQQQ QQLQQQLQNF WATQYEEIDQ ATDFKNHSLP LARIKKIMKA DEDVRMISAE 120 APVIFARACE MFILELTLRA WNHTEENKRR TLQKNDIAAA ITRTDIFDFL VDIVPREDLK 180 DEVLASMSRG PLPVGASSEG LPYYYMPQQP TPPVGAPAMY VGKPVDPGIY GQQSRPYMAQ 240 HMWPQQPPPP SDS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 149 | 155 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 4e-75 | NF-YC family protein |