PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY32190.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 486aa MW: 54248.9 Da PI: 6.5473

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY32190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.8	2e-11	176	232	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g TEY32190.1 176 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 232 57*****************4444.2455535555.779999************98 PP
2	AP2	36	1.7e-11	264	309	7	55
AP2 7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 r++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g TEY32190.1 264 RRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 309 89********988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MAVMNNWLGF SLSSNQHHHP QNPELGFHSD HPHECFDPIF ETFNTNPPPQ DWNVKDDSNI 60 DSFSCNQNQE TPKLENFLEV GVQSFAAADD DNHHNMINGS SHNMGLSMIK NWLRSHAAPP 120 PVDKPVDEAP PPPPEALSLS MSTSSHSSDS KLGGGGGCAV ESVPRKNIET FGQRTSIYRG 180 VTRHRWTGRY EAHLWDNSCR REGQTRKGRQ GGYDKEEKAA RAYDLAALKY WGTTTTTNLP 240 ISNYETEIEE MKHMTRQEYV ASLRRHHQHG RWQARIGRVA GNKDLYLGTF STQEEAAEAY 300 DVAAIKFRGL NAVTNFETSR YDVRGIMESV SLPIGAKRLK EGGKGDMRLL QMQRADKGTL 360 NNTYSWPIIG FEQARPTNIH PYQRMWCKQD EDANVGFNDI YHHLQLGGNQ GFLQTSMLQL 420 SNLSGLDSVP GPVSYENNAA CVGSGFGYEG AFGSSGDAYR NLYHQSQQLP SSGSAITNDC 480 TMWNGT

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MAVMNNWLGF SLSSNQHHHP QNPELGFHSD HPHECFDPIF ETFNTNPPPQ DWNVKDDSNI  60
DSFSCNQNQE TPKLENFLEV GVQSFAAADD DNHHNMINGS SHNMGLSMIK NWLRSHAAPP  120
PVDKPVDEAP PPPPEALSLS MSTSSHSSDS KLGGGGGCAV ESVPRKNIET FGQRTSIYRG  180
VTRHRWTGRY EAHLWDNSCR REGQTRKGRQ GGYDKEEKAA RAYDLAALKY WGTTTTTNLP  240
ISNYETEIEE MKHMTRQEYV ASLRRHHQHG RWQARIGRVA GNKDLYLGTF STQEEAAEAY  300
DVAAIKFRGL NAVTNFETSR YDVRGIMESV SLPIGAKRLK EGGKGDMRLL QMQRADKGTL  360
NNTYSWPIIG FEQARPTNIH PYQRMWCKQD EDANVGFNDI YHHLQLGGNQ GFLQTSMLQL  420
SNLSGLDSVP GPVSYENNAA CVGSGFGYEG AFGSSGDAYR NLYHQSQQLP SSGSAITNDC  480
TMWNGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-110	AP2 family protein