PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY31961.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 434aa MW: 47894.8 Da PI: 8.5522

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY31961.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.5	1.2e-05	78	100	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY31961.1 78 FVCEICNKGFQRDQNLQLHRRGH 100 89*******************88 PP
2	zf-C2H2	12.7	0.00037	155	177	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H + + TEY31961.1 155 WKCEKCSKRYAVQSDWKAHSKIC 177 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MLQGMGGVDD SLSNLTSAIS NEASFNSSSN GGTIPQQHMY NPSQPPPPKK RRNLPGNPDP 60 EAEVVALSPA ALMATNRFVC EICNKGFQRD QNLQLHRRGH NLPWKLKQRS NKEVVKKKVY 120 ICPEPSCVHH DPARALGDLT GIKKHFFRKH GEKKWKCEKC SKRYAVQSDW KAHSKICGTR 180 EYRCDCGTLF SRRDSFITHR AFCDALAEES SRAIPQTVPN PNHPQIHPFQ NPNFLQLKQE 240 TLNFTLPPWL SPPDSFSQNP TPNAFSAAGP SLMSATALLQ KAAQMGVTMS GPQGGKMPYH 300 GSDHEDQTIL AGQPNGQGFC ATSSAASTAV LPPRDEFVHG LGAYENMVMP STSGFQGFED 360 CFNGMFNAKR NVESFQQDGN LMGLRKEGGE DGKTRDFLGL RAFPHRDFSN MAGLDQMGSS 420 SSSFDHQNQA PWQS

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MLQGMGGVDD SLSNLTSAIS NEASFNSSSN GGTIPQQHMY NPSQPPPPKK RRNLPGNPDP  60
EAEVVALSPA ALMATNRFVC EICNKGFQRD QNLQLHRRGH NLPWKLKQRS NKEVVKKKVY  120
ICPEPSCVHH DPARALGDLT GIKKHFFRKH GEKKWKCEKC SKRYAVQSDW KAHSKICGTR  180
EYRCDCGTLF SRRDSFITHR AFCDALAEES SRAIPQTVPN PNHPQIHPFQ NPNFLQLKQE  240
TLNFTLPPWL SPPDSFSQNP TPNAFSAAGP SLMSATALLQ KAAQMGVTMS GPQGGKMPYH  300
GSDHEDQTIL AGQPNGQGFC ATSSAASTAV LPPRDEFVHG LGAYENMVMP STSGFQGFED  360
CFNGMFNAKR NVESFQQDGN LMGLRKEGGE DGKTRDFLGL RAFPHRDFSN MAGLDQMGSS  420
SSSFDHQNQA PWQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-126	C2H2 family protein