PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY31400.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 420aa MW: 45583.1 Da PI: 10.0216

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY31400.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.1	7.6e-06	187	209	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++Cg++Fs ++ L++H + H TEY31400.1 187 TCHKCGEHFSKWEALESHHLSnH 209 7*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MGEKKKKKDT PATVWFSLKK SLHCKSEPSD VHNPKTKKQL SSILTRKSGR SGCSRSIANL 60 KDVIHGSKRH LDRPPSCSPR SIGSSEFLNP IAHEVILSNT RCELKITGFG GGGGGAAAGE 120 NGGGSTYVGT LRPGTPGPGG HPTMHYFNPS FRNSATPPRK AAEREGLPPQ KRPSFEKDGG 180 NGGNGVTCHK CGEHFSKWEA LESHHLSNHA VTELIEGDSS RKIVEIICRS SWLKTESHCV 240 RIDRVLKVHN MQKTLARFED YRESVKAKAS KLPKKHPRCL ADGNELLRFH GTTLTCSLGL 300 SGSSSLCISE KCSVCRIIRE GFSTKRELKG GVGVFTTSTS GRAFESIEIP NEDPGVRKAL 360 IVCRVIAGRV HRPLENIGDI AGQTGFDSLA GKVGLYSNIE ELYLLNHKAL LPCFVVICKT

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MGEKKKKKDT PATVWFSLKK SLHCKSEPSD VHNPKTKKQL SSILTRKSGR SGCSRSIANL  60
KDVIHGSKRH LDRPPSCSPR SIGSSEFLNP IAHEVILSNT RCELKITGFG GGGGGAAAGE  120
NGGGSTYVGT LRPGTPGPGG HPTMHYFNPS FRNSATPPRK AAEREGLPPQ KRPSFEKDGG  180
NGGNGVTCHK CGEHFSKWEA LESHHLSNHA VTELIEGDSS RKIVEIICRS SWLKTESHCV  240
RIDRVLKVHN MQKTLARFED YRESVKAKAS KLPKKHPRCL ADGNELLRFH GTTLTCSLGL  300
SGSSSLCISE KCSVCRIIRE GFSTKRELKG GVGVFTTSTS GRAFESIEIP NEDPGVRKAL  360
IVCRVIAGRV HRPLENIGDI AGQTGFDSLA GKVGLYSNIE ELYLLNHKAL LPCFVVICKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27240.1	1e-151	C2H2 family protein