PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY31068.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 340aa MW: 38367.7 Da PI: 6.7274

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY31068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.1	1.4e-15	40	99	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g TEY31068.1 40 SVYRGVTRHRWTGRFEAHLWDkNCWNEaqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 99 78*****************999966655446***********************98 PP
2	AP2	52.3	1.4e-16	137	188	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g TEY31068.1 137 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAIAYDMAAIEYRG 188 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MVKLGQQKPG NASIPVNNPG TKVKRTRKTI PRDSPPKRSS VYRGVTRHRW TGRFEAHLWD 60 KNCWNEAQNK KGRQVYLGAY DDEEAAAHAY DLAALKYWGQ DTILNFPNEI LGMDGQSREE 120 YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVFG NKYLYLGTYA TQEEAAIAYD 180 MAAIEYRGLN AVTNFDLSRY IKWLRPNNNN NNNDTSSDQS LNLEYSGGAL TSPQLLQPAS 240 DATSSQPHHP TTATSALGLL LQSSKFKEMM EMTLAAEYPS TPTLSDPDPP QCTIPDDIKT 300 YFESNDFSEY NEQGDDIFGE LFMQPMVQFD SMLNAEDLVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-94	AP2 family protein