PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY30268.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | AP2 | ||||||||
Protein Properties | Length: 456aa MW: 51215.9 Da PI: 6.6405 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.8 | 1.7e-15 | 131 | 187 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+ p ++ + k+++lg f+ta Aa+a+++a+ k++g TEY30268.1 131 SQYRGVTFYRRTGRWESHIWYPLSRVedCGKQVYLGGFDTAHAAARAYDRAAIKFRG 187 78****************988655335456************************998 PP | |||||||
2 | AP2 | 41.1 | 4.5e-13 | 230 | 280 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g TEY30268.1 230 SQYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAAIKCNG 280 78********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 456 aa Download sequence |
MFNLNLAIDP TADPTETASD NHFDQMEHSG SSTSSVVNVE TSSTAGDDIS FSDHFVGFDI 60 WKINGESDKS SCGYVTKEFF PVSGREERMQ CLGLSGNRHE LAELRILAQE QHQQKRQLVK 120 KSRRGPRSRS SQYRGVTFYR RTGRWESHIW YPLSRVEDCG KQVYLGGFDT AHAAARAYDR 180 AAIKFRGLDA DINFNVCDYD EDLKQMRNLT KEEFVHILRR QSTGFSRGSS QYRGVTLHKC 240 GRWEARMGQF LGKKYIYLGL FDSEIEAARA YDKAAIKCNG REAVTNFEPS TYEEELSLEE 300 PIGASDLHNL DLNLSIAPPE RVLWEIHNME TESFQINYGS INLPESGIKG SASASVAAQL 360 PHEPGNVSQY PLMWRGADSC FRPVYEGTTI GKVVEVNPLA NWTRDHHHPS PLFSTAASSG 420 FATSSGPIHR QLPFTATPPH HYLSPVTTLN NGSHFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 3e-96 | AP2 family protein |