PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY29700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 207aa MW: 21799.8 Da PI: 7.5037 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 111.9 | 4.6e-35 | 18 | 113 | 1 | 95 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +C aCk+lrrkC+++C++ap+f +eq +++fa+vhk+FGasnv+kll ++p e+r+da+ +++yeA+ar+rdPvyG+v +++ + l+ ++a l+ TEY29700.1 18 PCGACKFLRRKCVTGCIFAPHFDSEQgAAHFAAVHKVFGASNVSKLLLHVPLEKRPDAVITICYEAQARLRDPVYGCVVNLQAEISYLQAHRATLE 113 7***********************9989**************************************************998888888888777665 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 207 aa Download sequence |
MSGSGGGGSS SGGGGGGPCG ACKFLRRKCV TGCIFAPHFD SEQGAAHFAA VHKVFGASNV 60 SKLLLHVPLE KRPDAVITIC YEAQARLRDP VYGCVVNLQA EISYLQAHRA TLELPTPPPQ 120 PPSLLAPPPP PLSIADLPAF SAVPATYDLS SLFDPTAWNL PHQSDTLTSQ FPTLRGGGDL 180 QELAREFLAR REPRTNQPAS ALPPHST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G00220.1 | 1e-57 | LBD family protein |