PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY29298.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 388aa MW: 42719.1 Da PI: 7.679

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY29298.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.4	6.9e-08	28	71	2	44
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrw 44 + WT eEd+ + a + ++ W++Ia ++ g+t ++k+++ TEY29298.1 28 LDWTREEDKAFEIALVTHYNDahMWAKIALAVP-GKTVQDLKLHY 71 57*******99999999999*******.********9 PP
2	Myb_DNA-binding	22.9	2e-07	112	155	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT+eE+ +++ + ++G g+Wk I+++ + + q+ s+ qk+ TEY29298.1 112 WTEEEHGQFLYGLWMFGRGDWKNISEYSVRTGSSTQVASHAQKF 155 ***************************556899****998 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MDSDRTSNNC FWTMGVNDAA SKDARTSLDW TREEDKAFEI ALVTHYNDAH MWAKIALAVP 60 GKTVQDLKLH YEALSVMAFE SGKMPLSIYP TRGDVLEKKE LKPEQAQRGA HWTEEEHGQF 120 LYGLWMFGRG DWKNISEYSV RTGSSTQVAS HAQKFFRRLS LTEKESKRVS INDITTLKPE 180 NLLAFEKETT RFCKGESSTA GTGELVPGNL ERAAAHAGIQ LLSGCATVAS RNAFGKRGRP 240 KKALSADENK LMLGPRYHRK KKAVACNESR LLPRFPERVP SETRNQLLFG GKNASSDAGK 300 LLLSGYHNEA PKDIGYQLLS GYPTQLAPPS GSLEITGHPT TTSYVTVGNS TGAAMQNIGV 360 LADGQYDIGA STDILDDVDL SLFPHFLD

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MDSDRTSNNC FWTMGVNDAA SKDARTSLDW TREEDKAFEI ALVTHYNDAH MWAKIALAVP  60
GKTVQDLKLH YEALSVMAFE SGKMPLSIYP TRGDVLEKKE LKPEQAQRGA HWTEEEHGQF  120
LYGLWMFGRG DWKNISEYSV RTGSSTQVAS HAQKFFRRLS LTEKESKRVS INDITTLKPE  180
NLLAFEKETT RFCKGESSTA GTGELVPGNL ERAAAHAGIQ LLSGCATVAS RNAFGKRGRP  240
KKALSADENK LMLGPRYHRK KKAVACNESR LLPRFPERVP SETRNQLLFG GKNASSDAGK  300
LLLSGYHNEA PKDIGYQLLS GYPTQLAPPS GSLEITGHPT TTSYVTVGNS TGAAMQNIGV  360
LADGQYDIGA STDILDDVDL SLFPHFLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11280.1	2e-31	MYB family protein