PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY29059.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 469aa MW: 52280.5 Da PI: 6.6292

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY29059.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.5	5.8e-17	138	187	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TEY29059.1 138 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 187 78*****************......55**********************997 PP
2	AP2	43	1.1e-13	248	298	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g TEY29059.1 248 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCNG 298 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MWDLNDSPDQ RRDDESEGCS DDKGKRVGSM SNSSSSAVVV EDLSEEDDDA DRGAFRKRSS 60 KIFGFSVDDD DAALVTRQFF PVDNSEAAAA GFPRAHWVGV KFCQSEPHAA AAAAFGKSAA 120 EVAQPLKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AHAAARAYDR 180 AAIKFRGVEA DINFSIEDYE DDLKQVVLIN VTCHYIVCFI FEQMSNLTKE EFVHVLRRQS 240 TGFPRGSSKY RGVTLHKCGR WEARMGQFLG KKYVYLGLFD TEVEAARAYD KAAIKCNGKE 300 AVTNFDPSIY DDELKSAESS NNAADHNLDL SLGNSASPQA GFRDQQQQQQ HSDGYNETET 360 LQLLSQAHLH SPESFRISNE APRYSHHQVY NRPLYAAQNY HFSGGGAAVE GGRNAGGEVS 420 VSRNEQQWQM NQAQMFATAA ASSGFPSAQT FRPQNWIQKN GIYPLMRPS

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MWDLNDSPDQ RRDDESEGCS DDKGKRVGSM SNSSSSAVVV EDLSEEDDDA DRGAFRKRSS  60
KIFGFSVDDD DAALVTRQFF PVDNSEAAAA GFPRAHWVGV KFCQSEPHAA AAAAFGKSAA  120
EVAQPLKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AHAAARAYDR  180
AAIKFRGVEA DINFSIEDYE DDLKQVVLIN VTCHYIVCFI FEQMSNLTKE EFVHVLRRQS  240
TGFPRGSSKY RGVTLHKCGR WEARMGQFLG KKYVYLGLFD TEVEAARAYD KAAIKCNGKE  300
AVTNFDPSIY DDELKSAESS NNAADHNLDL SLGNSASPQA GFRDQQQQQQ HSDGYNETET  360
LQLLSQAHLH SPESFRISNE APRYSHHQVY NRPLYAAQNY HFSGGGAAVE GGRNAGGEVS  420
VSRNEQQWQM NQAQMFATAA ASSGFPSAQT FRPQNWIQKN GIYPLMRPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-127	AP2 family protein