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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY28915.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 321aa MW: 36098.6 Da PI: 8.7007 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84 | 9.4e-27 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 k+ien rqvtfskRr+g++KKA+EL vLC+aevaviifs+tgkl+e++ TEY28915.1 9 KKIENVNSRQVTFSKRRAGLFKKANELAVLCEAEVAVIIFSNTGKLFEFA 58 68***********************************************8 PP | |||||||
2 | K-box | 64.1 | 5.2e-22 | 155 | 237 | 18 | 100 |
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +e + Lk+eie+L+ +q +l+G+dL+ +s +eL+ Le+qL ++l i+++K++lll+++ + +++e+++ en++Lr+++ee TEY28915.1 155 PKETDVLKEEIEKLKVKQLRLMGKDLTGMSSQELHLLERQLSEGLMCIKDRKEQLLLQELAQCRMQEQRAVLENETLRRQVEE 237 579999**************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MGRGKIEIKK IENVNSRQVT FSKRRAGLFK KANELAVLCE AEVAVIIFSN TGKLFEFANS 60 SCVCKVLSTS DLLKGYASSG TCYCLGRVKV EILFTKIPII CLAFCSSDSK CVNVDSKVRQ 120 WSGESMKKIL SRYKKCVDTT KSPAPELEPE KPTQPKETDV LKEEIEKLKV KQLRLMGKDL 180 TGMSSQELHL LERQLSEGLM CIKDRKEQLL LQELAQCRMQ EQRAVLENET LRRQVEELRG 240 FYPLSSSPTP LCIEYHKQSD PVKKEESSRS PETACNGGLA DETSDTTLQL GLPYGNSRKR 300 KTPDGETQSS TSETQFRRLH G |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 297 | 302 | SRKRKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57390.1 | 1e-43 | MIKC_MADS family protein |