PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY28837.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 479aa MW: 53010.3 Da PI: 8.3514

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY28837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.7	2e-05	77	99	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY28837.1 77 FVCEICSKGFQRDQNLQLHRRGH 99 89*******************88 PP
2	zf-C2H2	12.8	0.00035	154	176	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ TEY28837.1 154 WKCEKCSKKYAVQSDWKAHSKTC 176 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MMKTSAIQEE NISNLTTAST DASASSTGGE MYPPPCFPAQ TTPPPPPKKK RSQPGHPDPG 60 SEVISLSPRT LMATNRFVCE ICSKGFQRDQ NLQLHRRGHN LPWKLKQRSS KDVMRRKVYV 120 CPEASCVHHD PSRALGDLTG IKKHFFRKHG EKKWKCEKCS KKYAVQSDWK AHSKTCGTRE 180 YRCDCGTLFS RRDSFITHRA FCDALAEESA KSLTTTIIPS LQNAPNSLSH HINLQQIQSQ 240 LPFPIKKEHQ TFTLRPPWLP PQFQDFQENP QNHPNPNPNP NPNPNTSMGP TPFHHHHLPT 300 PYISATALLQ KATEMGSKSS GAHHAAGETP TTAGFGLKLA SCDHHQFING LAPFSNNKAA 360 SPPNSHSMLH DMMMISASGF DHQESAFEDE DLSFAGILNN NTSSSSSSKR VDESLDFDAT 420 FNQFGASNGG NHDDGMTRDF LGLRPLSQSD ILSFAGLSNC ITTTSCVEHQ TQTQRSWQG

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MMKTSAIQEE NISNLTTAST DASASSTGGE MYPPPCFPAQ TTPPPPPKKK RSQPGHPDPG  60
SEVISLSPRT LMATNRFVCE ICSKGFQRDQ NLQLHRRGHN LPWKLKQRSS KDVMRRKVYV  120
CPEASCVHHD PSRALGDLTG IKKHFFRKHG EKKWKCEKCS KKYAVQSDWK AHSKTCGTRE  180
YRCDCGTLFS RRDSFITHRA FCDALAEESA KSLTTTIIPS LQNAPNSLSH HINLQQIQSQ  240
LPFPIKKEHQ TFTLRPPWLP PQFQDFQENP QNHPNPNPNP NPNPNTSMGP TPFHHHHLPT  300
PYISATALLQ KATEMGSKSS GAHHAAGETP TTAGFGLKLA SCDHHQFING LAPFSNNKAA  360
SPPNSHSMLH DMMMISASGF DHQESAFEDE DLSFAGILNN NTSSSSSSKR VDESLDFDAT  420
FNQFGASNGG NHDDGMTRDF LGLRPLSQSD ILSFAGLSNC ITTTSCVEHQ TQTQRSWQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13810.1	1e-110	C2H2 family protein