PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY28794.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 415aa MW: 45458.4 Da PI: 7.673

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY28794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.8	9.7e-12	104	160	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + ++ ++ k + g ++ +e Aa+a++ a++k++g TEY28794.1 104 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEERAARAYDLAALKYWG 160 78*****************433.44555535555.779999************98 PP
2	AP2	34.2	6.2e-11	205	252	3	55
AP2 3 ykGV.rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV rw+++ grW A+I + +k +lg t eeAa+a++ a+ k++g TEY28794.1 205 YRGVtRWHHQHGRWQARIGRVAG---NKDLYLG---TQEEAAEAYDIAAIKFRG 252 9**************988532...577...99***********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MNMPPNFDDQ KREEGFNNPP LFYPPYQYGG GGGGGGGGLK TWLEKPAAEG GDLQALSLTV 60 HPSSQVVAPL QAVAEGKKRA VAKSGAAKEA VPRKSIDTFG QRTSQYRGVT RHRWTGRYEA 120 HLWDNSCRKE GQTRKGRQGG YDKEERAARA YDLAALKYWG PTTHINFPLS DYERELEDMK 180 SMTRQEFVAH LRRKSSGFSR GASMYRGVTR WHHQHGRWQA RIGRVAGNKD LYLGTQEEAA 240 EAYDIAAIKF RGTSAVTNFD ISRYDVKRIC LSSTLIAGDL AKRSPKHPGL VGVEDYNSCA 300 SSASPQAPLL ITNGEERGEA EELADMMWNA NPDDNRATKD DAQPGQGQGS GESPGPHMSP 360 PRMDQVIGDG GGYSRGYFLE GQKYVDVGCD LGGSGRAEPD VGLVHEAPTF ALWSE

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MNMPPNFDDQ KREEGFNNPP LFYPPYQYGG GGGGGGGGLK TWLEKPAAEG GDLQALSLTV  60
HPSSQVVAPL QAVAEGKKRA VAKSGAAKEA VPRKSIDTFG QRTSQYRGVT RHRWTGRYEA  120
HLWDNSCRKE GQTRKGRQGG YDKEERAARA YDLAALKYWG PTTHINFPLS DYERELEDMK  180
SMTRQEFVAH LRRKSSGFSR GASMYRGVTR WHHQHGRWQA RIGRVAGNKD LYLGTQEEAA  240
EAYDIAAIKF RGTSAVTNFD ISRYDVKRIC LSSTLIAGDL AKRSPKHPGL VGVEDYNSCA  300
SSASPQAPLL ITNGEERGEA EELADMMWNA NPDDNRATKD DAQPGQGQGS GESPGPHMSP  360
PRMDQVIGDG GGYSRGYFLE GQKYVDVGCD LGGSGRAEPD VGLVHEAPTF ALWSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-117	AP2 family protein