PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY28324.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 476aa MW: 51959.4 Da PI: 6.2959

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY28324.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50	7.3e-16	293	344	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TEY28324.1 293 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 344 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MAPDNNWLSF SLSSMEMLNS SSSSSSHQPN HSHHYYSFGD NFYTSGWPSH KSADDDIHYM 60 QHQQQAPKLE DFFAAGGDST ETQDSSLTHI YDHHHGAAAY FDGAEQQDLK SIIGFQSFSA 120 NSASNVDDSP FAAKTQSPGE SATELAPYSH SPAAAANGLS LDVSIDNNSN TDKAVVAADS 180 KKIADTFDID GQGDMKRIYG ITAVEERAKQ EKGVKHLAVN MPTLPQLVCG YDKEDKAARS 240 YDLAALKYWG PTATTNFPMS NYAKEVEEMK HMTKQEFIAS LRRKSSGFSR GASIYRGVTR 300 HHQQGRWQAR IGRVAGNKDL YLGTFATEEE AAEAYDIAAI KFRGINAVTN FEMNRYDVEA 360 IAKCPLPIGG TAKRLKHSLE GVDKALPLGS SSMLQTPCNS SGGSSISFAA IQPSSGIPCG 420 VPLDHSTPYY HHNLFHHLYP NDPVASDTSS SVSSLTTPMG MMQAPGEYFV WPHHTY

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MAPDNNWLSF SLSSMEMLNS SSSSSSHQPN HSHHYYSFGD NFYTSGWPSH KSADDDIHYM  60
QHQQQAPKLE DFFAAGGDST ETQDSSLTHI YDHHHGAAAY FDGAEQQDLK SIIGFQSFSA  120
NSASNVDDSP FAAKTQSPGE SATELAPYSH SPAAAANGLS LDVSIDNNSN TDKAVVAADS  180
KKIADTFDID GQGDMKRIYG ITAVEERAKQ EKGVKHLAVN MPTLPQLVCG YDKEDKAARS  240
YDLAALKYWG PTATTNFPMS NYAKEVEEMK HMTKQEFIAS LRRKSSGFSR GASIYRGVTR  300
HHQQGRWQAR IGRVAGNKDL YLGTFATEEE AAEAYDIAAI KFRGINAVTN FEMNRYDVEA  360
IAKCPLPIGG TAKRLKHSLE GVDKALPLGS SSMLQTPCNS SGGSSISFAA IQPSSGIPCG  420
VPLDHSTPYY HHNLFHHLYP NDPVASDTSS SVSSLTTPMG MMQAPGEYFV WPHHTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.1	1e-99	AP2 family protein