PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY27680.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 466aa MW: 50954 Da PI: 6.3556

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY27680.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.1	5.7e-19	106	192	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L+ea++e+ +l+rg+l++ +Weev++ + r + ++s +qCk+k +nl+kryk ++++ +++ ++s++p+f+q+e TEY27680.1 106 EWSDTAIACLLEAYSEKFVQLNRGNLRGRDWEEVAAMVseRCENQSKSVEQCKNKVDNLKKRYKLERHRLSNG-GVATSHWPWFKQME 192 5***********************************666677899*********************9.556679*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MIYHNRLVFT SVSVTLTPPM ASCDDDFSLL DDPQNPNSAP PSAAAASHTP PPYQINPYDH 60 DSDPFDSDPN SLSAKRLADR DDIHSGTSKR TRLPSSAGDY RKDREEWSDT AIACLLEAYS 120 EKFVQLNRGN LRGRDWEEVA AMVSERCENQ SKSVEQCKNK VDNLKKRYKL ERHRLSNGGV 180 ATSHWPWFKQ MEQIVGNSIS AKAAAEEEKS SAIGADSYSN RQTKRLGTVV NSPGSQINSI 240 KLKPSNNLRW RRVVLKISGA ALAGSAPNNI EPKVAMLIAR EVSIACHVGV EVAIVVGGRN 300 FFCGDAWVEQ TGLDRCTAYQ IGNVIYNQND GNRDEFRPTA VCFGETGCAD ARAEFIFNAR 360 GNPLFSTDTA AALRASEIHA DAVLKGTNME GIYVRDARNN SIAAEHISFR ELASRGASPM 420 DMMAVTFCEE NGIPVGIFNL HEPGNISRAL CGERVGTLID QTGPVA

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MIYHNRLVFT SVSVTLTPPM ASCDDDFSLL DDPQNPNSAP PSAAAASHTP PPYQINPYDH  60
DSDPFDSDPN SLSAKRLADR DDIHSGTSKR TRLPSSAGDY RKDREEWSDT AIACLLEAYS  120
EKFVQLNRGN LRGRDWEEVA AMVSERCENQ SKSVEQCKNK VDNLKKRYKL ERHRLSNGGV  180
ATSHWPWFKQ MEQIVGNSIS AKAAAEEEKS SAIGADSYSN RQTKRLGTVV NSPGSQINSI  240
KLKPSNNLRW RRVVLKISGA ALAGSAPNNI EPKVAMLIAR EVSIACHVGV EVAIVVGGRN  300
FFCGDAWVEQ TGLDRCTAYQ IGNVIYNQND GNRDEFRPTA VCFGETGCAD ARAEFIFNAR  360
GNPLFSTDTA AALRASEIHA DAVLKGTNME GIYVRDARNN SIAAEHISFR ELASRGASPM  420
DMMAVTFCEE NGIPVGIFNL HEPGNISRAL CGERVGTLID QTGPVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	1e-149	Trihelix family protein