PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY27658.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 139aa    MW: 16194.7 Da    PI: 10.4893
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY27658.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF412.4e-132291340
                HHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
      SRF-TF 13 fskRrngilKKAeELSvLCdaevaviif 40
                f kRr g+lKKA+ELS+LC+++v ++i 
  TEY27658.1  2 FRKRRDGLLKKANELSILCGVDVGIVIH 29
                88***********************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MFRKRRDGLL KKANELSILC GVDVGIVIHK KEQSNAVLWP SPESFRSRVQ KFMEFRDEER  60
KRRMSTHEGL VKQMVQGEME NLEKLKNAIQ LKESQQLVVK SMQTNSFNGF GIDQLNAMNS  120
FADHMLKKLQ QRDNDLNAK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16086RKRRMSTHEGLVKQMVQGEMENLEKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65330.18e-16M-type_MADS family protein