PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY27450.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 544aa MW: 58942.4 Da PI: 9.3555

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY27450.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	79	101	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F r nL+ H r H TEY27450.1 79 FVCEVCNKGFQREQNLQLHRRGH 101 89*******************88 PP
2	zf-C2H2	11	0.0014	155	177	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC++C+k + +s+ k H +t+ TEY27450.1 155 YKCEKCSKKYAVHSDWKAHSKTC 177 9******************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MAASSSSPFL SLRDENEQPQ QQQLLPSAAA APPSAAPANK RRRNQPGNPS KFITIIKPTD 60 PDAEVIALSP KTLMATNRFV CEVCNKGFQR EQNLQLHRRG HNLPWKLRQK STKEVRRKVY 120 LCPEPSCVHH DPSRALGDLT GIKKHYSRKH GEKKYKCEKC SKKYAVHSDW KAHSKTCGTR 180 EYRCDCGTLF SRRDSFITHR AFCDALAQES ARNLNPPSLS SIGSHLLGLS QHDQMNQGAL 240 SSHDILRLGR PGQQYETLVS PGGFHPSPRG LFLHPNHDHD HQDHQNQSPH SAMLPNKSSL 300 QSLMQLPQLH MNNTANTSSN SSAAGLFNLS FFPGNNNNAA STIDGGSHHS AAGYDSTLFS 360 SGNLMSIAIP SLYSTSQAMQ TPSGGQMSAT ALLQKAAQMG STATNNGGAS SSLLKSFGKS 420 PDHHSFGGSG VYGGSNSGSG NHLHDLMMNS IAAAEGGSAA SMFEQAEMEE YRGFHGGNSN 480 SQQSGFSSLE QAGRLTRDFL GVGEIVRSVR EQQQQQSGME HLGSLDLQGK TTSHTQPFGG 540 RSFQ

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MAASSSSPFL SLRDENEQPQ QQQLLPSAAA APPSAAPANK RRRNQPGNPS KFITIIKPTD  60
PDAEVIALSP KTLMATNRFV CEVCNKGFQR EQNLQLHRRG HNLPWKLRQK STKEVRRKVY  120
LCPEPSCVHH DPSRALGDLT GIKKHYSRKH GEKKYKCEKC SKKYAVHSDW KAHSKTCGTR  180
EYRCDCGTLF SRRDSFITHR AFCDALAQES ARNLNPPSLS SIGSHLLGLS QHDQMNQGAL  240
SSHDILRLGR PGQQYETLVS PGGFHPSPRG LFLHPNHDHD HQDHQNQSPH SAMLPNKSSL  300
QSLMQLPQLH MNNTANTSSN SSAAGLFNLS FFPGNNNNAA STIDGGSHHS AAGYDSTLFS  360
SGNLMSIAIP SLYSTSQAMQ TPSGGQMSAT ALLQKAAQMG STATNNGGAS SSLLKSFGKS  420
PDHHSFGGSG VYGGSNSGSG NHLHDLMMNS IAAAEGGSAA SMFEQAEMEE YRGFHGGNSN  480
SQQSGFSSLE QAGRLTRDFL GVGEIVRSVR EQQQQQSGME HLGSLDLQGK TTSHTQPFGG  540
RSFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	5e-98	C2H2 family protein