PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY27436.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C2H2
Protein Properties Length: 233aa    MW: 25247.2 Da    PI: 5.8851
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY27436.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.0002482104123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  TEY27436.1  82 FSCNYCRRKFYSSQALGGHQNAH 104
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MMPPNMNMES EDESEVSSQV ASNTSVYSKE ECRNTSSCLD DSFIKPVTLD LTLGLNGSLE  60
PDLTPPSDAV SNNPPPPSSR VFSCNYCRRK FYSSQALGGH QNAHKRERTL AKRAMRMEMF  120
SDRYASLASL PLHGSAFRSL GIQAHATMHP EQGIRGGGGG GGGARFIDQG YFGLPLCMEY  180
EEGELSWPGS FRQMEGLRGH PAFESGQGSD MAAGAALPPR TEHSSLPDLN LKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.13e-39C2H2 family protein