PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY27305.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 490aa MW: 54328.7 Da PI: 7.6957

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY27305.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.4	6.3e-12	207	263	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +++Aa+a++ a++k++g TEY27305.1 207 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqSRKGRQ-GGYDMEQKAARAYDLAALKYWG 263 78*****************87776664446655.7799************98 PP
2	AP2	46.6	8.7e-15	306	357	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g TEY27305.1 306 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 357 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MADESNNSNW LGFSLSAPSM DDHPSSNAVT TPAPINFNYP GFCYGDAPSF YSHLTVMPLK 60 SDGSLCLMEA INRSQPQAPK LEDFFGVGHP HHYEGGMALS LDSMYYHANT QPTATDFLSS 120 DHLHLQEYPL YYAPPDHASP PDQISGGEAY NELQTLSLSM SPGSQSSCAT APVALVSYDN 180 KKRGQEKVDQ KQIVHRKSID TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC KKEGQSRKGR 240 QGGYDMEQKA ARAYDLAALK YWGPSTHINF PLENYQQELE EMKNMSRQEY VAHLRRKSSG 300 FSRGASIYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDV AAIKFRGVNA 360 VTNFDITRYD VKRIMESNGL LPGEMARRNK EIVVVTASSS NDNNAVVVAK ECEWRVALPN 420 GMGEAGKMSL ASSREGSPDR NNVLPLQFPA LPNKFFPCPT GGEGAAAWIP AAGPMRAQVP 480 LFSAWAADIK

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MADESNNSNW LGFSLSAPSM DDHPSSNAVT TPAPINFNYP GFCYGDAPSF YSHLTVMPLK  60
SDGSLCLMEA INRSQPQAPK LEDFFGVGHP HHYEGGMALS LDSMYYHANT QPTATDFLSS  120
DHLHLQEYPL YYAPPDHASP PDQISGGEAY NELQTLSLSM SPGSQSSCAT APVALVSYDN  180
KKRGQEKVDQ KQIVHRKSID TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC KKEGQSRKGR  240
QGGYDMEQKA ARAYDLAALK YWGPSTHINF PLENYQQELE EMKNMSRQEY VAHLRRKSSG  300
FSRGASIYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDV AAIKFRGVNA  360
VTNFDITRYD VKRIMESNGL LPGEMARRNK EIVVVTASSS NDNNAVVVAK ECEWRVALPN  420
GMGEAGKMSL ASSREGSPDR NNVLPLQFPA LPNKFFPCPT GGEGAAAWIP AAGPMRAQVP  480
LFSAWAADIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-164	AP2 family protein