PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY27274.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 229aa MW: 26454.2 Da PI: 9.8287 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.9 | 2.7e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr+g+lKKA+EL +LCda+v viifsstgklye+s+ TEY27274.1 10 RIDNSTSRQVTFSKRRTGLLKKAKELAILCDAQVGVIIFSSTGKLYEFSN 59 9***********************************************95 PP | |||||||
2 | K-box | 79.5 | 8e-27 | 81 | 171 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++ + +q+e+a L++++ Lq+++R+l+Ge+L Ls+k+Lq++e+qLe sl+ +R kK+++l e+i++l +k + ++een +L kk++ TEY27274.1 81 NPGSEIKFWQREAATLRQQLGDLQENHRKLMGEELYGLSVKDLQRIEEQLELSLRGVRMKKEQILSEEIQQLSRKGQLIHEENIQLYKKVK 171 5667899*********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MGRGKIVIQR IDNSTSRQVT FSKRRTGLLK KAKELAILCD AQVGVIIFSS TGKLYEFSNT 60 SMKSVIERYT KAKEDQQQLL NPGSEIKFWQ REAATLRQQL GDLQENHRKL MGEELYGLSV 120 KDLQRIEEQL ELSLRGVRMK KEQILSEEIQ QLSRKGQLIH EENIQLYKKV KLIEQQNKDL 180 YTKAYGAENY SPFEVPSGLA LYDYAPIQLQ LSQPRPQSTS TQSSEQVWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 6e-97 | MIKC_MADS family protein |