PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY27198.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

FAR1

Protein Properties

Length: 770aa MW: 88702.8 Da PI: 5.711

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY27198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.6	3.2e-21	163	246	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fYn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ ++r+etrtgC a++++++ ++++w++++++leHnH + TEY27198.1 163 NFYNYYAKELGFGIRVKSSWTKRNSKEKRGAVLCCNCEGFKTMKEAC-----TRRKETRTGCLAMIRLRLVESNRWRLDEVKLEHNHLF 246 6***************************************98776.....8999*****************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 770 aa Download sequence
MADAAVFSPV GDGLSPNSGI EIIVDETSEN SEDPLDEGED GFKIEAHNLG NEDSKILKLK 60 NTDLENAIEQ VLGSERADLE NDGKQVLGIH NVDESEHVIE IERNDHESNY EQMLKIQSND 120 RDSSSDQMLG IPANGAQNDH TLGKSYLQPV EGMEFESYDD AYNFYNYYAK ELGFGIRVKS 180 SWTKRNSKEK RGAVLCCNCE GFKTMKEACT RRKETRTGCL AMIRLRLVES NRWRLDEVKL 240 EHNHLFDHQK AQNSRSNKKI EAGIKRKSSS AVDVEVKTIK LYRTPAFDAV NHGSSSERDF 300 SHHTDQLKHL KFGNGDLEAM QNYFRQAQLA DPNFFYVMDL NDEGYVKNVF WINSRSRAAY 360 GYFSDVVVVD STCLSKKHNI LLLSFSGLNH HGQSVLMGCG LLAEETFETY VWLMRAWLTC 420 MFGRPPQTII TDQCKALQGA ISEVFPRAHH CLHLLLVMQS IHERLGEVGE SQVFQTVLNR 480 TVYSTTKIEE FETGWEEMIQ HFSMRDHEWL NSLYEDRERW APVYFKNSIF AGIFTYQPCE 540 YTNPFFHGYL DDQTSWTEFF KVYESLQEKM IQREALDDIE SREFRPVLST SCSYEAQVCE 600 LYTKEIFLKF QEEVALMPGC FSVTHVHVNG PIITYMVKER NDGGDAREAH NFEVVYDKVG 660 MEVRCICCCF SFRGYLCRHA LTVLNYNSAE EIPGQYILTR WRKDVKRLYI PNIGSNNIDI 720 SNPVQWHEHL YRRAMHVVAE GMASREHHTV AWQAFKESLN KVRLATEKPV

Sequence ? help Back to Top

Protein Sequence Length: 770 aa Download sequence

MADAAVFSPV GDGLSPNSGI EIIVDETSEN SEDPLDEGED GFKIEAHNLG NEDSKILKLK  60
NTDLENAIEQ VLGSERADLE NDGKQVLGIH NVDESEHVIE IERNDHESNY EQMLKIQSND  120
RDSSSDQMLG IPANGAQNDH TLGKSYLQPV EGMEFESYDD AYNFYNYYAK ELGFGIRVKS  180
SWTKRNSKEK RGAVLCCNCE GFKTMKEACT RRKETRTGCL AMIRLRLVES NRWRLDEVKL  240
EHNHLFDHQK AQNSRSNKKI EAGIKRKSSS AVDVEVKTIK LYRTPAFDAV NHGSSSERDF  300
SHHTDQLKHL KFGNGDLEAM QNYFRQAQLA DPNFFYVMDL NDEGYVKNVF WINSRSRAAY  360
GYFSDVVVVD STCLSKKHNI LLLSFSGLNH HGQSVLMGCG LLAEETFETY VWLMRAWLTC  420
MFGRPPQTII TDQCKALQGA ISEVFPRAHH CLHLLLVMQS IHERLGEVGE SQVFQTVLNR  480
TVYSTTKIEE FETGWEEMIQ HFSMRDHEWL NSLYEDRERW APVYFKNSIF AGIFTYQPCE  540
YTNPFFHGYL DDQTSWTEFF KVYESLQEKM IQREALDDIE SREFRPVLST SCSYEAQVCE  600
LYTKEIFLKF QEEVALMPGC FSVTHVHVNG PIITYMVKER NDGGDAREAH NFEVVYDKVG  660
MEVRCICCCF SFRGYLCRHA LTVLNYNSAE EIPGQYILTR WRKDVKRLYI PNIGSNNIDI  720
SNPVQWHEHL YRRAMHVVAE GMASREHHTV AWQAFKESLN KVRLATEKPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	0.0	FAR1 family protein