PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY27009.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

WOX

Protein Properties

Length: 287aa MW: 32392.6 Da PI: 5.2229

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY27009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.6	3.2e-21	105	165	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + +ps+++++e+A++l +++e++V++WFqNrRa+ k+ TEY27009.1 105 RQRWTPTPMQLQILERIFDQgIGTPSKQKIKEIASELsqhgQISETNVYNWFQNRRARSKR 165 89***************99************************************97 PP
2	Wus_type_Homeobox	102.7	2.6e-33	105	167	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r+RWtPtp Q++iLe+++++G+ tP+k++i++i++eL+++G+i+++NV++WFQNr+aR+++kq TEY27009.1 105 RQRWTPTPMQLQILERIFDQGIGTPSKQKIKEIASELSQHGQISETNVYNWFQNRRARSKRKQ 167 89***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MEWEKQPPQQ AEEPAGGGMF VKVMTDEQME VLRKQIAVYA TICEQLVELH KSLTSQTDLA 60 VSLGQKVQWE TICVVVVYLS CMGVRLGNLY CDPLITSGAH KITGRQRWTP TPMQLQILER 120 IFDQGIGTPS KQKIKEIASE LSQHGQISET NVYNWFQNRR ARSKRKQQAA PSNNAESEVE 180 TEVESPNDKK TKPEEFQPQN ILTSRAEDLC FQNPQTSSAI HSVDPRTSKP EPMLPPEGSS 240 KFGGNFGQMS FYGNMLSNPR MDQFIGKIEV PGNYNPYLQQ DDYNMDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	159	167	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	4e-72	WOX family protein