PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY26972.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family NF-YC
Protein Properties Length: 210aa    MW: 24348.4 Da    PI: 6.8958
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY26972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC119.91.1e-3759161299
       NF-YC   2 lksfwekq....iekatdfk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95 
                 l++fw ++    ++  td+k  h+lPlarikk++k+de+v+misa++Pvl+skacelf++el++ +w+h++ n+r+tl+++d+a a+       fl di
  TEY26972.1  59 LHNFWRERlseiRDAPTDVKtPHTLPLARIKKVMKSDEKVRMISADTPVLFSKACELFVMELSVGAWMHTQLNNRKTLQRNDVAFAIRDHSLLAFLNDI 157
                 889**9997666677899*977***************************************************************************** PP

       NF-YC  96 vprd 99 
                 vp +
  TEY26972.1 158 VPLE 161
                 *976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MNYNRERNVS NSRHTLSASQ LHLQMHNFMP MPSSSIHVDH DLLEAERRAS FMNHLKHNLH  60
NFWRERLSEI RDAPTDVKTP HTLPLARIKK VMKSDEKVRM ISADTPVLFS KACELFVMEL  120
SVGAWMHTQL NNRKTLQRND VAFAIRDHSL LAFLNDIVPL ESHLRDDDES IPNTQFQDND  180
DSIPNNNNNN NIDHGVYVPH PVPPNYMQVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.12e-35NF-YC family protein