PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY26853.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 262aa MW: 29373.3 Da PI: 9.9526

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY26853.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	63.3	2.7e-20	4	49	6	51
HHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 6 ksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 + nr+ f kRr ++KKA+EL vLCda++a+ii+ss+gk++e+++ TEY26853.1 4 SENREAGFNKRRVSLFKKAKELAVLCDAQIAIIIISSHGKVHEFAT 49 679*****************************************86 PP
2	K-box	37.1	1.3e-13	93	166	26	100
K-box 26 keienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ ++L++ +l G+dL+ +s eL+ L ++L++++ i+++K++ll++++e+++k+e+ + ++n++L+++++e TEY26853.1 93 QKADELKSR-QKLFGKDLTGMSSHELNGLVKKLKEGMLFIKDTKMQLLKNELEKSRKQEQLVVQKNQMLQRQVKE 166 677788877.89************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MAKSENREAG FNKRRVSLFK KAKELAVLCD AQIAIIIISS HGKVHEFATN SSMQEILTRY 60 KMCNQLKNRN ALQLNQENPE EEVPKEAGVS GQQKADELKS RQKLFGKDLT GMSSHELNGL 120 VKKLKEGMLF IKDTKMQLLK NELEKSRKQE QLVVQKNQML QRQVKELQNF YPRAYYPMPI 180 SIHCPATEHD RGLLPHTNRS AQLAITGSSE PEHHASNEIS PPSASSAEPK ISDCGSPTQR 240 NPQKPADKDS SKNHSGSKSN TS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13790.1	8e-29	MIKC_MADS family protein