PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY26428.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 281aa MW: 31301 Da PI: 9.3858

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY26428.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	82.2	3.3e-26	70	120	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKA+EL +LCdae+a+i+fs tg+ly+ys+ TEY26428.1 70 KKIDNLTSRQVTFSKRRRGLFKKAQELATLCDAEIALIVFSATGRLYDYST 120 68***********************************************96 PP
2	K-box	36	3e-13	158	234	26	94
K-box 26 keienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk........ekelqeenkaL 94 ke++ L e+++l Ge+L+ L ++eL +Le+ +e++l ++ +kKn+ll+++i++++ + e +l+een +L TEY26428.1 158 KELSALTLELKQLNGEELQGLGMNELARLERVVESALGRVVKKKNDLLMSEISKMKTRacsdlnlyEIQLEEENAML 234 67889999************************************************984333333345555555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MLVRFDSSSS ALPLPHYLSF ITSSKIHNQI FRFALLFTLS LSLSLGLVAF AVWASSSAGR 60 EMVRQKIQIK KIDNLTSRQV TFSKRRRGLF KKAQELATLC DAEIALIVFS ATGRLYDYST 120 SSMIQIIQKL KMHTEGSSRF RQILQNQEGG DNNGATSKEL SALTLELKQL NGEELQGLGM 180 NELARLERVV ESALGRVVKK KNDLLMSEIS KMKTRACSDL NLYEIQLEEE NAMLKQLAEN 240 TRNTAELGSS VESITNSGGR CLDDDRSVSD TALKLGYVLH L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	7e-51	MIKC_MADS family protein