PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY25681.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 459aa MW: 50088.9 Da PI: 6.7176

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY25681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51.3	2.9e-16	139	188	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+ +++a+ k++g TEY25681.1 139 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARVYDRAAIKFRG 188 78*****************......55**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MLDLNVDAVD CGKAEAAADS VASTTKTTSA NNNAAAEEPD CRSWTREKSA STLNFAILNN 60 DVIEIEDDPD NDAGNELQLF PIADSPPSTS PAMVRAKYWL NLSMPEVGGL ELGVNKGAST 120 PVQPPQAKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARVYD 180 RAAIKFRGLD ADINFTTSDY DEEMKQVWTL EVYGQHLDSC DSVCAYEVGD LQMKGLTKEE 240 FVHILRRQSN GFARGSSKYR GVTLHKCGRW EARMGQFLGK KAYDKAAIKS NGREAIANFE 300 LSNYEFNSGN GGNGSSLDLN LGMSLSSEGQ QGNKATRNPH FPVQSSELPD GKRLKVEPSS 360 APQELMQMFP PIWASIYSGS APNNKELATL ASGEAVPLPG YSSNWQWKMS SHGMVTPVPI 420 LASSAASSGF SPTTSPYFTS AMPLTNRAQF PSMAFHSLQ

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MLDLNVDAVD CGKAEAAADS VASTTKTTSA NNNAAAEEPD CRSWTREKSA STLNFAILNN  60
DVIEIEDDPD NDAGNELQLF PIADSPPSTS PAMVRAKYWL NLSMPEVGGL ELGVNKGAST  120
PVQPPQAKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARVYD  180
RAAIKFRGLD ADINFTTSDY DEEMKQVWTL EVYGQHLDSC DSVCAYEVGD LQMKGLTKEE  240
FVHILRRQSN GFARGSSKYR GVTLHKCGRW EARMGQFLGK KAYDKAAIKS NGREAIANFE  300
LSNYEFNSGN GGNGSSLDLN LGMSLSSEGQ QGNKATRNPH FPVQSSELPD GKRLKVEPSS  360
APQELMQMFP PIWASIYSGS APNNKELATL ASGEAVPLPG YSSNWQWKMS SHGMVTPVPI  420
LASSAASSGF SPTTSPYFTS AMPLTNRAQF PSMAFHSLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.1	3e-76	AP2 family protein