PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY25350.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 347aa MW: 39129.1 Da PI: 6.5138

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY25350.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	96.4	1.2e-30	109	159	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCd eva+iifs++gklye++s TEY25350.1 109 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDSEVALIIFSNRGKLYEFCS 159 79***********************************************96 PP
2	K-box	92.6	6.6e-31	179	274	5	100
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + ++ ++ ++s+++e+ kLk+++e+Lqr qR+llG+dL++L++++L+++e+qLe+slk+iRs++++++l+q+++lq kek + ++nkaL++klee TEY25350.1 179 EVNHPSKDIEQSSYKEYLKLKSKYESLQRYQRQLLGDDLGPLNINDLEHIEHQLETSLKHIRSTRTQVMLDQLSDLQSKEKLMLDANKALERKLEE 274 555667777899*********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MQRWWEPGRA PLGFLDETEY ERLTTAAAAG EPVEEAATTF EFGNSAVEEL RGRENPYSQR 60 SFASASFSSC CRENPRMLLF CAISGGGGDS GGVAMGFLWI MGRGRVELKR IENKINRQVT 120 FAKRRNGLLK KAYELSVLCD SEVALIIFSN RGKLYEFCST SNMLKTLERY QKCSYGSLEV 180 NHPSKDIEQS SYKEYLKLKS KYESLQRYQR QLLGDDLGPL NINDLEHIEH QLETSLKHIR 240 STRTQVMLDQ LSDLQSKEKL MLDANKALER KLEEIYAANH LQQSWAVGGG DHSNNYAPHH 300 AQSQAFFQPL DCNSTLQIGY SEPVSSSQMT AATDVQNVNG IVPGWML

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MQRWWEPGRA PLGFLDETEY ERLTTAAAAG EPVEEAATTF EFGNSAVEEL RGRENPYSQR  60
SFASASFSSC CRENPRMLLF CAISGGGGDS GGVAMGFLWI MGRGRVELKR IENKINRQVT  120
FAKRRNGLLK KAYELSVLCD SEVALIIFSN RGKLYEFCST SNMLKTLERY QKCSYGSLEV  180
NHPSKDIEQS SYKEYLKLKS KYESLQRYQR QLLGDDLGPL NINDLEHIEH QLETSLKHIR  240
STRTQVMLDQ LSDLQSKEKL MLDANKALER KLEEIYAANH LQQSWAVGGG DHSNNYAPHH  300
AQSQAFFQPL DCNSTLQIGY SEPVSSSQMT AATDVQNVNG IVPGWML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	1e-102	MIKC_MADS family protein