PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY25348.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 342aa MW: 38915.5 Da PI: 10.0557

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY25348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	80.6	1.1e-25	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ rqvtfskRr g+ KKA+E+S LCda+va+i+fs++gkl+ y+s TEY25348.1 9 KRIENKISRQVTFSKRRSGLWKKANEISLLCDADVALIVFSTSGKLFHYCS 59 79***********************************************96 PP
2	K-box	81.4	2.1e-27	204	289	14	99
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 e l ++ kL ++ L r+ R++ GedL++Ls++eLq+Le+qL+++lk+iR+kKn+l++e+i++lqkkek+lq++n+a++k++ TEY25348.1 204 KEDLLLDHPKLGHHLQYLHRTMRNYAGEDLDPLSFRELQSLEHQLQNALKRIRNKKNQLMHESISQLQKKEKSLQHQNHAIKKEVR 289 56666788899***********************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGRGRVEMKR IENKISRQVT FSKRRSGLWK KANEISLLCD ADVALIVFST SGKLFHYCSH 60 PSLDVHLRRQ APPYHNLRSS SSLTKPIQLP ATAPCSYLLL QHGFSFTYGQ LPVLAAYTPP 120 PHCPSPSSAK IVLEWTATSK GRQFDRIFGV WIDGAEGLRS CTAEPFAAGI IWTVKKEVTS 180 MGRLVERYEQ HTYSQKIGAP NEPKEDLLLD HPKLGHHLQY LHRTMRNYAG EDLDPLSFRE 240 LQSLEHQLQN ALKRIRNKKN QLMHESISQL QKKEKSLQHQ NHAIKKEVRE KQQIGESREK 300 PREAQDISSS KLHNLTMASG AEEDGGSNSL IPPWLLDHVP RR

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGRGRVEMKR IENKISRQVT FSKRRSGLWK KANEISLLCD ADVALIVFST SGKLFHYCSH  60
PSLDVHLRRQ APPYHNLRSS SSLTKPIQLP ATAPCSYLLL QHGFSFTYGQ LPVLAAYTPP  120
PHCPSPSSAK IVLEWTATSK GRQFDRIFGV WIDGAEGLRS CTAEPFAAGI IWTVKKEVTS  180
MGRLVERYEQ HTYSQKIGAP NEPKEDLLLD HPKLGHHLQY LHRTMRNYAG EDLDPLSFRE  240
LQSLEHQLQN ALKRIRNKKN QLMHESISQL QKKEKSLQHQ NHAIKKEVRE KQQIGESREK  300
PREAQDISSS KLHNLTMASG AEEDGGSNSL IPPWLLDHVP RR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60910.1	2e-33	MIKC_MADS family protein