PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY25318.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 347aa MW: 37505.1 Da PI: 5.0428

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY25318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3.2e-16	29	74	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed l ++v +G ++W++Iar ++ gR++k+c++rw + TEY25318.1 29 KGPWSPDEDAMLSQLVGNFGARNWSLIARGIP-GRSGKSCRLRWCNQ 74 79****************************.*********985 PP
2	Myb_DNA-binding	57.6	2.9e-18	81	125	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd ++++a+ +G++ W++Iar ++ gRt++ +k++w++ TEY25318.1 81 RKPFTDEEDRIILEAHSTHGNK-WASIARLLP-GRTDNAIKNHWNST 125 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MCGGDDDDEN LVVLEDGGGE TKKSLDRVKG PWSPDEDAML SQLVGNFGAR NWSLIARGIP 60 GRSGKSCRLR WCNQLDPAVK RKPFTDEEDR IILEAHSTHG NKWASIARLL PGRTDNAIKN 120 HWNSTLRRRC LELGKSKLEP GTAVEDTSAE KSKASSEETP SYGDAYSVKS SEGKDVSSLE 180 LVDDSNLSDK ARFGIQYIER SRGPMPLCRP VARISAFTVY NPIDGTETAC PSPSLPVSNS 240 DAGMSKLLQG TGSELSLIIV PQQCGHGCCE ISNGMVRVNS LLGPEFMDHV EPPSFTSHEL 300 AELAADISNA AWSKSGLESS NIKAMDNMAC GLLCSSSINE RGVLDKM

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MCGGDDDDEN LVVLEDGGGE TKKSLDRVKG PWSPDEDAML SQLVGNFGAR NWSLIARGIP  60
GRSGKSCRLR WCNQLDPAVK RKPFTDEEDR IILEAHSTHG NKWASIARLL PGRTDNAIKN  120
HWNSTLRRRC LELGKSKLEP GTAVEDTSAE KSKASSEETP SYGDAYSVKS SEGKDVSSLE  180
LVDDSNLSDK ARFGIQYIER SRGPMPLCRP VARISAFTVY NPIDGTETAC PSPSLPVSNS  240
DAGMSKLLQG TGSELSLIIV PQQCGHGCCE ISNGMVRVNS LLGPEFMDHV EPPSFTSHEL  300
AELAADISNA AWSKSGLESS NIKAMDNMAC GLLCSSSINE RGVLDKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	1e-86	MYB family protein