PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY25205.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 464aa MW: 51079.1 Da PI: 5.1946

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY25205.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.4e-12	276	318	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ +Lr+++Pk + K++ a+iL A++Y+k+L TEY25205.1 276 MAERRRRKKLNDRLYTLRSVVPKiS------KMDRASILGDAIDYLKEL 318 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MLNGMLWMDG SKGGDGDDEQ ASSWPAPDPP QNNNNNNDKE NNEDMSLANN TTNEEMEMSS 60 FKSMLEAENE DWYIANGSFS PRFNNPMAVD SSASCSPTSA SVFSHQLNYF SQPKPLLIQN 120 NNNNNNNNNA AFESGYLETA LNNNSSTIHH RIPNCGDAML DGNSFLFNNR SKVLKPLGSS 180 MGPQPTLFQK RAALRKNLGS NLGCLSLDNR NNNNNNQILV FNERKLGMSS GDDLSIDGSN 240 FNCDSDDDNL LESSVRNVVV DGKGKKKKGL PAKNLMAERR RRKKLNDRLY TLRSVVPKIS 300 KMDRASILGD AIDYLKELLQ KINDLHNELE AIPGASTPTT NMSFYPMTPT TPGIPARIKE 360 ELCPSAFASP LSSPTGQPAR VEVRLREGNA VNIHMFCGRK PGILLSTLTA IDNLGLDIQQ 420 AVISCFNGFA LDIFRAEQWE EGQELNPDQI KAVLLDSAGF HGMH

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MLNGMLWMDG SKGGDGDDEQ ASSWPAPDPP QNNNNNNDKE NNEDMSLANN TTNEEMEMSS  60
FKSMLEAENE DWYIANGSFS PRFNNPMAVD SSASCSPTSA SVFSHQLNYF SQPKPLLIQN  120
NNNNNNNNNA AFESGYLETA LNNNSSTIHH RIPNCGDAML DGNSFLFNNR SKVLKPLGSS  180
MGPQPTLFQK RAALRKNLGS NLGCLSLDNR NNNNNNQILV FNERKLGMSS GDDLSIDGSN  240
FNCDSDDDNL LESSVRNVVV DGKGKKKKGL PAKNLMAERR RRKKLNDRLY TLRSVVPKIS  300
KMDRASILGD AIDYLKELLQ KINDLHNELE AIPGASTPTT NMSFYPMTPT TPGIPARIKE  360
ELCPSAFASP LSSPTGQPAR VEVRLREGNA VNIHMFCGRK PGILLSTLTA IDNLGLDIQQ  420
AVISCFNGFA LDIFRAEQWE EGQELNPDQI KAVLLDSAGF HGMH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	265	284	KKKKGLPAKNLMAERRRRKK
2	266	285	KKKKGLPAKNLMAERRRRKK
3	278	285	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-115	bHLH family protein