PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY25048.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 126aa MW: 14263.5 Da PI: 8.2576 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 115.2 | 4.3e-36 | 5 | 110 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeer......edamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +CaaCk+lrr+C +dC++apyfp+++p++f++vhk++Gasnv k+l+ ++ee+ +a+++l yeA +r++dPvyG++g+++ l+qql+ ++ + TEY25048.1 5 RCAACKHLRRRCLSDCIFAPYFPSNKPRRFEYVHKIYGASNVGKILQVINEEQDlpvrcrGEAAETLWYEAYCRIKDPVYGCAGMVSVLHQQLNVAECQ 103 6**********************************************99888755666669************************************** PP DUF260 94 lallkee 100 la++k+e TEY25048.1 104 LATVKAE 110 **99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence |
MNSSRCAACK HLRRRCLSDC IFAPYFPSNK PRRFEYVHKI YGASNVGKIL QVINEEQDLP 60 VRCRGEAAET LWYEAYCRIK DPVYGCAGMV SVLHQQLNVA ECQLATVKAE VAALRPAYLC 120 DSSCFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26660.1 | 3e-41 | LBD family protein |